RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TXNDC8Q6A555 127 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 PHC3Q8NDX5 983 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 NUDT8Q8WV74 236 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 SEPT8Q92599 483 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 EME1Q96AY2 570 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 CDKN2AIPNLQ96HQ2 116 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RNF38Q9H0F5 515 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TRPM5Q9NZQ8 1165 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ZMYM5Q9UJ78 669 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TRIM17Q9Y577 477 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RAI2Q9Y5P3 530 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 UNC80Q8N2C7 3258 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 A0A1B0GTL3 188 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ZNF839A8K0R7 811 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 UBFD1O14562 309 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 PIP5K1BO14986 540 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 COCHO43405 550 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 HOXD10P28358 340 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MC4RP32245 332 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 CCNHP51946 323 aaPredicted RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RHOAP61586 193 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 IL10RBQ08334 325 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TCTN1Q2MV58 587 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 C18orf21Q32NC0 220 aaPredicted RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 NAIF1Q69YI7 327 aaPredicted RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 IRGCQ6NXR0 463 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ZNF549Q6P9A3 640 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 FAM151BQ6UXP7 276 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 FBXO39Q8N4B4 442 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 ARL14EPQ8N8R7 260 aaPredicted RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RP9Q8TA86 221 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 SPPL2BQ8TCT7 592 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 DDI1Q8WTU0 396 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 SMG9Q9H0W8 520 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 TNKS2Q9H2K2 1166 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 VPS45Q9NRW7 570 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 MARCH5Q9NX47 278 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 DONSONQ9NYP3 566 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 VTI1BQ9UEU0 232 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 RPL26L1Q9UNX3 145 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
UBE3B-208ENST00000538070 CEP290O15078 2479 aa8.7□□□□□ -1.02
UBE3B-208ENST00000538070 FAM149AA5PLN7 773 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 KLKB1P03952 638 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CKMP06732 381 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ATXN1LP0C7T5 689 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 HGFP14210 728 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PSMC3P17980 439 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PRDX3P30048 256 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SLC7A2P52569 658 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SH3BP2P78314 561 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 GPR17Q13304 367 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CDH18Q13634 790 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 GRB7Q14451 532 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 C6orf52Q5T4I8 152 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CCSAPQ6IQ19 270 aaPredicted RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ISCA2Q86U28 154 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PIANPQ8IYJ0 282 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CPNE9Q8IYJ1 553 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CLDN19Q8N6F1 224 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CDYL2Q8N8U2 506 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 DNAJB14Q8TBM8 379 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 RDH11Q8TC12 318 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 VPS33AQ96AX1 596 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SLC22A12Q96S37 553 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 C1orf21Q9H246 121 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 HACD3Q9P035 362 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SCN10AQ9Y5Y9 1956 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 OR6C75A6NL08 312 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 RPP40O75818 363 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SEC24AO95486 1093 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 LYNP07948 512 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 WEE1P30291 646 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 GGT5P36269 586 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 MTTPP55157 894 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 GK3PQ14409 553 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ARMC12Q5T9G4 340 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PSAPL1Q6NUJ1 521 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 FRA10AC1Q70Z53 315 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CAMK1DQ8IU85 385 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 MYLIPQ8WY64 445 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 DPF3Q92784 378 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 C1orf74Q96LT6 269 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 AKTIPQ9H8T0 292 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ZBTB26Q9HCK0 441 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 OLA1Q9NTK5 396 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 MAGEA13PA6NCF6 341 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SAC3D1A6NKF1 404 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ARVCFO00192 962 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SYN3O14994 580 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SLC7A4O43246 635 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 AKAP10O43572 662 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms