RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 HES6Q96HZ4 224 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 QKIQ96PU8 341 aaKnown RBP eCLIP8.4□□□□□ -1.06
SPARC-208ENST00000538026 TEX101Q9BY14 249 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 UBP1Q9NZI7 540 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 SEPT10Q9P0V9 454 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CD84Q9UIB8 345 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 ANGPTL2Q9UKU9 493 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 TTLL3Q9Y4R7 772 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 IGSF10Q6WRI0 2623 aa8.4□□□□□ -1.07
SPARC-208ENST00000538026 LOC285095A0A1B0GVY8 99 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 FAM149AA5PLN7 773 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 CAPN8A6NHC0 703 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 F5H423 210 aaPredicted RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 APOC4-APOC2K7ER74 178 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 TAF4O00268 1085 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 PPP1R12AO14974 1030 aaPredicted RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 YY2O15391 372 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 APOC2P02655 101 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 CKMT2P17540 419 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 NFKB1P19838 968 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 CHRNA4P43681 627 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 HK3P52790 923 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 RWDD2BP57060 319 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 SRP54P61011 504 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 COPS2P61201 443 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 HNRNPKP61978 463 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPARC-208ENST00000538026 OTUD4Q01804 1114 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 DPTQ07507 201 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 KIF5AQ12840 1032 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 MSLNQ13421 630 aaPredicted RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 SMAD1Q15797 465 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 DEFB133Q30KQ1 61 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 PRRT3Q5FWE3 981 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 ENPP7Q6UWV6 458 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 MICALCLQ6ZW33 695 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 TMPRSS7Q7RTY8 843 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 NLRP8Q86W28 1048 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 NRROSQ86YC3 692 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 HID1Q8IV36 788 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 FAM181AQ8N9Y4 354 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 LPCAT1Q8NF37 534 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 LMX1AQ8TE12 382 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 P3H4Q92791 437 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 NUS1Q96E22 293 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 RBM41Q96IZ5 413 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 APOLD1Q96LR9 279 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 MLPHQ9BV36 600 aaPredicted RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 BOCQ9BWV1 1114 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 FRMD8Q9BZ67 464 aaPredicted RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 TMEM168Q9H0V1 697 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 LUC7LQ9NQ29 371 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 FTSJ1Q9UET6 329 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 TMPRSS11EQ9UL52 423 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 MSRB2Q9Y3D2 182 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 PLEKHM1Q9Y4G2 1056 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 NEUROG3Q9Y4Z2 214 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
SPARC-208ENST00000538026 CSNK1G3Q9Y6M4 447 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 DGKBQ9Y6T7 804 aa8.39□□□□□ -1.07
SPARC-208ENST00000538026 PTPRQQ9UMZ3 2332 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 CCDC66A2RUB6 948 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 FADS2P1A8MWK0 482 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 LMO7DNF2Z398 122 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 PSMD11O00231 422 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TOR1BO14657 336 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 AQP9O43315 295 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 PMPCBO75439 489 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TRIM16O95361 564 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 CYP2A6P11509 494 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 CKMT1AP12532 417 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 ACP1P24666 158 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 SPINT3P49223 89 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 THOP1P52888 689 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 NAP1L1P55209 391 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 WNT3AP56704 352 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 GSDMDP57764 484 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 KIAA1024LP59773 190 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 RPL26P61254 145 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 CDK3Q00526 305 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 INSM1Q01101 510 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 PPARDQ03181 441 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 XRCC4Q13426 336 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 SIX1Q15475 284 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 SLC14A2Q15849 920 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 KCTD19Q17RG1 926 aaPredicted RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 HENMT1Q5T8I9 393 aaKnown RBP8.38□□□□□ -1.07
SPARC-208ENST00000538026 FAXCQ5TGI0 409 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 ZNF662Q6ZS27 426 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 USP45Q70EL2 814 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 PEX26Q7Z412 305 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TMC3Q7Z5M5 1100 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 HEATR4Q86WZ0 1026 aa8.38□□□□□ -1.07
SPARC-208ENST00000538026 CCDC50Q8IVM0 306 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms