RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 NUDT2P50583 147 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 HERVK_113P63132 956 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 PABPC1LQ4VXU2 614 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 ZNF678Q5SXM1 525 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 TMEM198Q66K66 360 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 AAGABQ6PD74 315 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 LINGO4Q6UY18 593 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 TMEM150AQ86TG1 271 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 FBXW8Q8N3Y1 598 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 RYBPQ8N488 228 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 RHEBL1Q8TAI7 183 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 LPGAT1Q92604 370 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 ERVK-6Q9BXR3 956 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 TFB2MQ9H5Q4 396 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 MEAF6Q9HAF1 191 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 ZBTB26Q9HCK0 441 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 NMRK1Q9NWW6 199 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 NDE1Q9NXR1 346 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 LHX3Q9UBR4 397 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 VPS28Q9UK41 221 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 PRPF19Q9UMS4 504 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 FIS1Q9Y3D6 152 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 WASF2Q9Y6W5 498 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 SRP72O76094 671 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 PDHA1P08559 390 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 ANPEPP15144 967 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 ATP6V1C1P21283 382 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 MNX1P50219 401 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 TRAF2Q12933 501 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 INO80DQ53TQ3 878 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 KYQ8NBH2 561 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 SH3RF2Q8TEC5 729 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 NRG4Q8WWG1 115 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 EXT2Q93063 718 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 VWCEQ96DN2 955 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 ASB2Q96Q27 587 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 LBHD1Q9BQE6 289 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 RC3H2Q9HBD1 1191 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 ZNF334Q9HCZ1 680 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 MRPL17Q9NRX2 175 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 TAS2R13Q9NYV9 303 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 HACD3Q9P035 362 aa15.64■□□□□ 0.09
MKS1-204ENST00000537529 MTF2Q9Y483 593 aaPredicted RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 COPG1Q9Y678 874 aaKnown RBP15.64■□□□□ 0.09
MKS1-204ENST00000537529 ANKRD66B4E2M5 251 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 AIM2O14862 343 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 SUPT7LO94864 414 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 PRSS56P0CW18 603 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 ACADSP16219 412 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 MZF1P28698 734 aaPredicted RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 FMO4P31512 558 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 KCNC1P48547 511 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CLNS1AP54105 237 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 INHBCP55103 352 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 RHOAP61586 193 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CREMQ03060 361 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 RAD51Q06609 339 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CDH18Q13634 790 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 PPM1LQ5SGD2 360 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 EFHBQ8N7U6 833 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 PTGR2Q8N8N7 351 aaPredicted RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 AUTS2Q8WXX7 1259 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 TMA16Q96EY4 203 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 ZNF333Q96JL9 665 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 MARK4Q96L34 752 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 SERPINI1Q99574 410 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.63■□□□□ 0.09
MKS1-204ENST00000537529 STX7O15400 261 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 MAP3K7O43318 606 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 OLFM2O95897 454 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CD160O95971 181 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 ABL2P42684 1182 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 MTTPP55157 894 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 DEFB103AP81534 67 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 UNC50Q53HI1 259 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 AARS2Q5JTZ9 985 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 Q6ZNB5 142 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 RPS27LQ71UM5 84 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 TMCO2Q7Z6W1 182 aaPredicted RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 PELI3Q8N2H9 469 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 ARL14EPQ8N8R7 260 aaPredicted RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 DCAF4L2Q8NA75 395 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CCDC124Q96CT7 223 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 CYP2S1Q96SQ9 504 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 FEM1AQ9BSK4 669 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 DERL2Q9GZP9 239 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 LSM7Q9UK45 103 aaKnown RBP15.63■□□□□ 0.09
MKS1-204ENST00000537529 TRAF6Q9Y4K3 522 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 CPQQ9Y646 472 aa15.63■□□□□ 0.09
MKS1-204ENST00000537529 PYGLP06737 847 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 CLTBP09497 229 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 MC4RP32245 332 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 PPM1AP35813 382 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 CSKP41240 450 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 TTPAP49638 278 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 ATP6V0D1P61421 351 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 SQLEQ14534 574 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms