RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 CLCN5P51795 746 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PRKAA2P54646 552 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 NRF1Q16656 503 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 GK5Q6ZS86 529 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 AHI1Q8N157 1196 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 RP9Q8TA86 221 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PDCD6IPQ8WUM4 868 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 EXT2Q93063 718 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 VTI1BQ9UEU0 232 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 SCN5AQ14524 2016 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ANKRD36A6QL64 1941 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ATP6AP2A0A1C7CYW4 349 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 LRRC14BA6NHZ5 514 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ENPP3O14638 875 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 SLC7A4O43246 635 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ATP6AP2O75787 350 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 WISP3O95389 354 aaPredicted RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 GOT2P00505 430 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 FGFR3P22607 806 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 SP3Q02447 781 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 IL10RBQ08334 325 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 AGAP9Q5VTM2 703 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ABI1Q8IZP0 508 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ADCY4Q8NFM4 1077 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CALML6Q8TD86 181 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ZNF696Q9H7X3 374 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 A0A0U1RQS6 177 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CCDC162PA2VCL2 907 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 H3BSA7 217 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 PRAMEF11O60813 436 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 RNASEH2AO75792 299 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 GJB5O95377 273 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 FAM58BPP0C7Q3 252 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 NELFEP18615 380 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 TACR2P21452 398 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ME2P23368 584 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 DNAJB1P25685 340 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CDH13P55290 713 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 DNAJB13P59910 316 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 GPR17Q13304 367 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 MYBPC3Q14896 1274 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 PTPRRQ15256 657 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CYTH1Q15438 398 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 SLC14A2Q15849 920 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CUZD1Q86UP6 607 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 FATE1Q969F0 183 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 ZFRQ96KR1 1074 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
TRIM25-202ENST00000537230 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRIM25-202ENST00000537230 PRSS51A0A1B0GVH4 220 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SCAMP3O14828 347 aaKnown RBP12.86□□□□□ -0.35
TRIM25-202ENST00000537230 HOXD9P28356 352 aaPredicted RBP12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SLC5A2P31639 672 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SGSHP51688 502 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 ART3Q13508 389 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 ZNF235Q14590 738 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 PARP15Q460N3 678 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 FBXO48Q5FWF7 155 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 LHX8Q68G74 356 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 LRRC8DQ7L1W4 858 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 PGAM4Q8N0Y7 254 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 PELI3Q8N2H9 469 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SEMA6AQ9H2E6 1030 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 PDFQ9HBH1 243 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 PTGDR2Q9Y5Y4 395 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SLCO1B7G3V0H7 640 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
TRIM25-202ENST00000537230 CDK4P11802 303 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 HPCAP84074 193 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 APOFQ13790 326 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 ATP6V1E2Q96A05 226 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 CYP2S1Q96SQ9 504 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 FBRSL1Q9HCM7 1045 aaKnown RBP12.86□□□□□ -0.35
TRIM25-202ENST00000537230 DMTF1Q9Y222 760 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 SPO11Q9Y5K1 396 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 C5orf42Q9H799 3197 aa12.86□□□□□ -0.35
TRIM25-202ENST00000537230 H3BMM5 538 aa12.85□□□□□ -0.35
TRIM25-202ENST00000537230 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
TRIM25-202ENST00000537230 CSPG5O95196 566 aa12.85□□□□□ -0.35
TRIM25-202ENST00000537230 ALDH2P05091 517 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms