RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 LIG3P49916 1009 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 CDH4P55283 916 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 CDC16Q13042 620 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 MYBPC3Q14896 1274 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 AGERQ15109 404 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPSF7-217ENST00000537162 TMCO4Q5TGY1 634 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 GDPD4Q6W3E5 623 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 SPOCD1Q6ZMY3 1216 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 ENDOVQ8N8Q3 282 aaKnown RBP9.43□□□□□ -0.9
CPSF7-217ENST00000537162 NETO2Q8NC67 525 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 SGSM3Q96HU1 749 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 C9orf72Q96LT7 481 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 WDR77Q9BQA1 342 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-217ENST00000537162 SPON2Q9BUD6 331 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 OLAHQ9NV23 265 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 OGFRQ9NZT2 677 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 HESX1Q9UBX0 185 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 SERTAD1Q9UHV2 236 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 SUFUQ9UMX1 484 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 PCDHGC4Q9Y5F7 938 aa9.43□□□□□ -0.9
CPSF7-217ENST00000537162 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 HAX1O00165 279 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 O00370 1275 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
CPSF7-217ENST00000537162 CALCAP01258 141 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 GM2AP17900 193 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TRIM23P36406 574 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ADCY8P40145 1251 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ACTR1BP42025 376 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ACTR1AP61163 376 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 GPS2Q13227 327 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
CPSF7-217ENST00000537162 MYLK3Q32MK0 819 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 C5orf22Q49AR2 442 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ARTNQ5T4W7 220 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 RRAGBQ5VZM2 374 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 LEKR1Q6ZMV7 388 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 STXBP4Q6ZWJ1 553 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TFAP2DQ7Z6R9 452 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 PPP1R3BQ86XI6 285 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 C12orf56Q8IXR9 622 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 CCDC65Q8IXS2 484 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 GALNT16Q8N428 558 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 SFRP1Q8N474 314 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ADAMTS18Q8TE60 1221 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TFAP2BQ92481 460 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 SEMA4DQ92854 862 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 FAM149B1Q96BN6 582 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 PANK2Q9BZ23 570 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 PDE7BQ9NP56 450 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ANLNQ9NQW6 1124 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TRNAU1APQ9NX07 287 aaKnown RBP9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ST6GALNAC2Q9UJ37 374 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 TCFL5Q9UL49 500 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
CPSF7-217ENST00000537162 ANK2Q01484 3957 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 I6L893 689 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-217ENST00000537162 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-217ENST00000537162 THAP12O43422 761 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 CREB3O43889 395 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 WISP2O76076 250 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 C9P02748 559 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 ALPPP05187 535 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 HOXC4P09017 264 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-217ENST00000537162 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 CD19P15391 556 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 AGAP20933 346 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 KELP23276 732 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 GCLMP48507 274 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 RRADP55042 308 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 HHEXQ03014 270 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 FOLH1Q04609 750 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 PPP3CAQ08209 521 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 KCNAB1Q14722 419 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 IZUMO3Q5VZ72 239 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 MCTP1Q6DN14 999 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 FAAH2Q6GMR7 532 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 MTFR2Q6P444 385 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 FAM180AQ6UWF9 173 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 GFRALQ6UXV0 394 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 ZNF683Q8IZ20 524 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 SLC38A9Q8NBW4 561 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 MR1Q95460 341 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 HMCESQ96FZ2 354 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 TGM7Q96PF1 710 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 FRMD8Q9BZ67 464 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-217ENST00000537162 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
CPSF7-217ENST00000537162 PLEKHA6Q9Y2H5 1048 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 HCFC1P51610 2035 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 DOCK4Q8N1I0 1966 aa9.41□□□□□ -0.9
CPSF7-217ENST00000537162 AKAP6Q13023 2319 aa9.4□□□□□ -0.9
CPSF7-217ENST00000537162 PROM1O43490 865 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms