RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CTU2Q2VPK5 515 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 LRIT3Q3SXY7 679 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PYCR3Q53H96 274 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PERM1Q5SV97 790 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 LDLRAP1Q5SW96 308 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 C6orf141Q5SZD1 244 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 FAM160B1Q5W0V3 765 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 DENND5AQ6IQ26 1287 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 CRTC3Q6UUV7 619 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 KIAA0408Q6ZU52 694 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 CATSPER4Q7RTX7 472 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 NANOGNBQ7Z5D8 188 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 THAP5Q7Z6K1 395 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 FAM35AQ86V20 835 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 GALNT13Q8IUC8 556 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SCML4Q8N228 414 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 RNF149Q8NC42 400 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 C2CD4AQ8NCU7 369 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SMG8Q8ND04 991 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 BPIFB6Q8NFQ5 453 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 DYNC2LI1Q8TCX1 351 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF566Q969W8 418 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 ISG20Q96AZ6 181 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 BIRC7Q96CA5 298 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 LRRC58Q96CX6 371 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 HDAC11Q96DB2 347 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 CCDC126Q96EE4 140 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 NRBF2Q96F24 287 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 FAM167AQ96KS9 214 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 DHRS1Q96LJ7 313 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 C12orf42Q96LP6 360 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 DACH2Q96NX9 599 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TSPAN18Q96SJ8 248 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TRMOQ9BU70 441 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 NFKBIZQ9BYH8 718 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 KLHL25Q9H0H3 589 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 MINDY3Q9H8M7 445 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SP140LQ9H930 580 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 EML4Q9HC35 981 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 MOV10Q9HCE1 1003 aaKnown RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 CPNE5Q9HCH3 593 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 HPS4Q9NQG7 708 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 SDR39U1Q9NRG7 319 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 TREX1Q9NSU2 369 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 FAM49BQ9NUQ9 324 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 KLHL8Q9P2G9 620 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-215ENST00000536145 AURKCQ9UQB9 309 aa6.93□□□□□ -1.3
CPSF7-215ENST00000536145 PHIPQ8WWQ0 1821 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 KCNK1O00180 336 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NR5A2O00482 541 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 MTSS1O43312 755 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TPST1O60507 370 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 IPO13O94829 963 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SUPT7LO94864 414 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ALBP02768 609 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ALPLP05186 524 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 MTHFD1P11586 935 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 CDH1P12830 882 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 BMP1P13497 986 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 STMN1P16949 149 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TPH1P17752 444 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ERCC2P18074 760 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 IMPDH1P20839 514 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 UBA1P22314 1058 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 CD6P30203 668 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ADRA1AP35348 466 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 EIF2DP41214 584 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 MATKP42679 507 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ACADSBP45954 432 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NEK2P51955 445 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ARSFP54793 590 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 OSTNP61366 133 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NFKB2Q00653 900 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ECT2LQ008S8 904 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 POU4F1Q01851 419 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SCAPQ12770 1279 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 GRIK2Q13002 908 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 CAPRIN1Q14444 709 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 PGS1Q32NB8 556 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ADPRMQ3LIE5 342 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SLC25A52Q3SY17 297 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 AASDHQ4L235 1098 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TIGD2Q4W5G0 525 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 PCID2Q5JVF3 399 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF678Q5SXM1 525 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 KIAA0930Q6ICG6 404 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 BLOC1S3Q6QNY0 202 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 VASH1Q7L8A9 365 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 LIMS2Q7Z4I7 341 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 R3HCC1LQ7Z5L2 792 aaKnown RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ACOT1Q86TX2 421 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 UNC93AQ86WB7 457 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms