RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 KLHL22Q53GT1 634 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 WSCD1Q658N2 575 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 ZNF776Q68DI1 518 aaPredicted RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 TBC1D3GQ6DHY5 549 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 TBC1D3CQ6IPX1 549 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 B3GNT9Q6UX72 402 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 IQCHQ86VS3 1027 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 PLXDC1Q8IUK5 500 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 TBC1D3Q8IZP1 549 aaPredicted RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 CACNA2D3Q8IZS8 1091 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 MCPH1Q8NEM0 835 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 OR2T34Q8NGX1 318 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 OR14C36Q8NHC7 312 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 CHTF18Q8WVB6 975 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 SORCS1Q8WY21 1168 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 GOLGA1Q92805 767 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 CENPTQ96BT3 561 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 FOXRED1Q96CU9 486 aaPredicted RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 MRRFQ96E11 262 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 CMKLR1Q99788 373 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 OMDQ99983 421 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 CCDC3Q9BQI4 270 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 TARS2Q9BW92 718 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 CALN1Q9BXU9 219 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 ADGRE3Q9BY15 652 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 CPEB1Q9BZB8 566 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 ANKEF1Q9NU02 776 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 KLHL11Q9NVR0 708 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 DNAJC28Q9NX36 388 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 ELOVL2Q9NXB9 296 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 LRWD1Q9UFC0 647 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 DDX25Q9UHL0 483 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 LSM7Q9UK45 103 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 UBQLN1Q9UMX0 589 aaKnown RBP4.07□□□□□ -1.76
YBX3-205ENST00000536107 TNFSF13BQ9Y275 285 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 NEU2Q9Y3R4 380 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 SNX14Q9Y5W7 946 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 B3GALT1Q9Y5Z6 326 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 SDK2Q58EX2 2172 aa4.07□□□□□ -1.76
YBX3-205ENST00000536107 TACC2O95359 2948 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 LY6G6EA0A0G2JKS1 128 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 SLC12A8A0AV02 714 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 EME2A4GXA9 379 aaPredicted RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 CCDC169A6NNP5 214 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 E7EWF7 191 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PPEF2O14830 753 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CASC3O15234 703 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 PRC1O43663 620 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 KRT86O43790 486 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 RFPL1O75677 317 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 F9P00740 461 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CBSLP0DN79 551 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 EGR2P11161 476 aaPredicted RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 CYP3A5P20815 502 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PAX3P23760 479 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ACAT1P24752 427 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 OAS2P29728 719 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 CBSP35520 551 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ETFBP38117 255 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ETV5P41161 510 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 NAMPTP43490 491 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PGDP52209 483 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 SRSF4Q08170 494 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 KCNJ12Q14500 433 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PDIA5Q14554 519 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PPP2R5AQ15172 486 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 GEN1Q17RS7 908 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 DEFB133Q30KQ1 61 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 FAM214AQ32MH5 1076 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CATSPEREQ5SY80 951 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 HECTD3Q5T447 861 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ATP1A1-AS1Q5TC04 95 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 TMEM198Q66K66 360 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 DENND5BQ6ZUT9 1274 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 KDELC2Q7Z4H8 507 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ANKS1BQ7Z6G8 1248 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 TGIF2LYQ8IUE0 185 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ADGRF2Q8IZF7 708 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 NXPE1Q8N323 547 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ETNPPLQ8TBG4 499 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 TBCKQ8TEA7 893 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 NAT6Q93015 286 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 TMEM159Q96B96 161 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 P2RY11Q96G91 374 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 SLC45A3Q96JT2 553 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 SLITRK1Q96PX8 696 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 IL12RB2Q99665 862 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 EFHD1Q9BUP0 239 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 MRPL4Q9BYD3 311 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 HAPLN2Q9GZV7 340 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ZMYND12Q9H0C1 365 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ENKD1Q9H0I2 346 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CCDC113Q9H0I3 377 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 NEUROG2Q9H2A3 272 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 PABPC3Q9H361 631 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 DCTPP1Q9H773 170 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CHST11Q9NPF2 352 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 RBM28Q9NW13 759 aaKnown RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 KCMF1Q9P0J7 381 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms