RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TMCO5BA8MYB1 307 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DUX1O43812 170 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HEXIM1O94992 359 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FGF1P05230 155 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CDK11BP21127 795 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ETV3P41162 512 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GPR1P46091 355 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LIMK2P53671 638 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 POLE2P56282 527 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GPLD1P80108 840 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CDK3Q00526 305 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NR1D2Q14995 579 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DCAF12Q5T6F0 453 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ARHGAP36Q6ZRI8 547 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PTRH1Q86Y79 214 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HTR3CQ8WXA8 447 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DTD2Q96FN9 168 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC38A3Q99624 504 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DDA1Q9BW61 102 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TEX101Q9BY14 249 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PHTF1Q9UMS5 762 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
TNFRSF1A-207ENST00000535958 BOD1L1Q8NFC6 3051 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TCRBV5S1A1TA0A578 114 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 EFCAB7A8K855 629 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 H3BRJ5 948 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PSMD11O00231 422 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 RAD1O60671 282 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CEACAM5P06731 702 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 THRAP10827 490 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FGF3P11487 239 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LIFP15018 202 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 WT1P19544 449 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MPSTP25325 297 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CD1CP29017 333 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 UGT1A3P35503 534 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ARL4AP40617 200 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CTBSQ01459 385 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CA9Q16790 459 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NKAIN2Q5VXU1 208 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NRROSQ86YC3 692 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ARHGAP12Q8IWW6 846 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PELI3Q8N2H9 469 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ATPAF2Q8N5M1 289 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NPWQ8N729 165 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NKD1Q969G9 470 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 EFHD1Q9BUP0 239 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC12A9Q9BXP2 914 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FRMD8Q9BZ67 464 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PCDHGC4Q9Y5F7 938 aa12.94□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TLN1Q9Y490 2541 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SDK2Q58EX2 2172 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 IGHV1OR21-1A0A087WYE8 117 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CYSRT1A8MQ03 144 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LGALS16A8MUM7 142 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PYGLP06737 847 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 IVLP07476 585 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GM2AP17900 193 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SERPINB6P35237 376 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ADCY8P40145 1251 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 OGDHQ02218 1023 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC10A7Q0GE19 358 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 COLEC12Q5KU26 742 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ARMC12Q5T9G4 340 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 C17orf82Q86X59 251 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GALNT13Q8IUC8 556 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PSTKQ8IV42 348 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NAGSQ8N159 534 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 C9orf43Q8TAL5 461 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 AP2M1Q96CW1 435 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GPN2Q9H9Y4 310 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FANCLQ9NW38 375 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TUBD1Q9UJT1 453 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC17A4Q9Y2C5 497 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 B3GALT1Q9Y5Z6 326 aa12.93□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms