RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CDK3Q00526 305 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 ILF3Q12906 894 aaKnown RBP eCLIP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 EIF3IQ13347 325 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 TRIM14Q14142 442 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 C14orf28Q4W4Y0 310 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 SPECC1LQ69YQ0 1117 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 Q6ZVL8 140 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 TSPAN33Q86UF1 283 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 CBARPQ8N350 705 aaPredicted RBP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 OR8K1Q8NGG5 319 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 CCL4L1Q8NHW4 92 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 PIH1D2Q8WWB5 315 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 MAML1Q92585 1016 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 LIN37Q96GY3 246 aaPredicted RBP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 GSDMCQ9BYG8 508 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 EPB41L5Q9HCM4 733 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 RBM22Q9NW64 420 aaKnown RBP eCLIP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 APPL1Q9UKG1 709 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 PPIL1Q9Y3C6 166 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 COL27A1Q8IZC6 1860 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 A0A1W2PQM1 296 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 NOBOXO60393 691 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 MAP3K6O95382 1288 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 CEACAM5P06731 702 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 PDHA1P08559 390 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 TPM1P09493 284 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 PNLIPP16233 465 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 CA4P22748 312 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 CCNCP24863 283 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 GPR1P46091 355 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 GNPDA1P46926 289 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 INHBCP55103 352 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 LRRC66Q68CR7 880 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 B3GNT8Q7Z7M8 397 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 FBXO39Q8N4B4 442 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 GPBAR1Q8TDU6 330 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 FATE1Q969F0 183 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 PRR11Q96HE9 360 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 TMEM74Q96NL1 305 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 TSGA13Q96PP4 275 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 PACSIN1Q9BY11 444 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 FRMD8Q9BZ67 464 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 FOXP3Q9BZS1 431 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 TRNAU1APQ9NX07 287 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 LRIT1Q9P2V4 623 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
CLSTN3-204ENST00000535313 KIF26BQ2KJY2 2108 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 PMS2P1A4D2B8 440 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 CDRT15L2A8MXV6 281 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 PLD2O14939 933 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 NUDT21O43809 227 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 AKR1B10O60218 316 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 FZD6O60353 706 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 ITGA2BP08514 1039 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 CCNB1P14635 433 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 ZNF30P17039 623 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 MAN1A1P33908 653 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 TAS2R40P59535 323 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 DSC2Q02487 901 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 DPTQ07507 201 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 PEX6Q13608 980 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 HLTFQ14527 1009 aaKnown RBP eCLIP16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 PTPRRQ15256 657 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 ALG1LQ6GMV1 187 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 RAB11FIP2Q7L804 512 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 TECPR1Q7Z6L1 1165 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 FAF2Q96CS3 445 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 AP2M1Q96CW1 435 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 DNAJC7Q99615 494 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 DNPEPQ9ULA0 475 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 SUFUQ9UMX1 484 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 RNF215Q9Y6U7 377 aa16.15■□□□□ 0.18
CLSTN3-204ENST00000535313 UNC13CQ8NB66 2214 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 A0A0J9YYE9 177 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SSU72P8A0A1W2PR75 194 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 TK2O00142 265 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 ATXN7O15265 892 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 ZW10O43264 779 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 TRBC1P01850 177 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 PYGLP06737 847 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 TMEM253P0C7T8 217 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 CCKBRP32239 447 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 PTSQ03393 145 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 GBE1Q04446 702 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 BIRC2Q13490 618 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 MESDQ14696 234 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SPRED1Q7Z699 444 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 CLEC14AQ86T13 490 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SFTPA2Q8IWL1 248 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 LSM14AQ8ND56 463 aaKnown RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 CCNYQ8ND76 341 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 ZDHHC1Q8WTX9 485 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC39A7Q92504 469 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms