RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PLD5Q8N7P1 536 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 Q8N9G6 341 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 CCL4L1Q8NHW4 92 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 AP2M1Q96CW1 435 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 HDAC11Q96DB2 347 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 ATXN7L3BQ96GX2 97 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 NAF1Q96HR8 494 aaKnown RBP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 MCCC1Q96RQ3 725 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 RBM15Q96T37 977 aaKnown RBP eCLIP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 DPEP2Q9H4A9 486 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 PCDH9Q9HC56 1237 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 DGKBQ9Y6T7 804 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 FREM2Q5SZK8 3169 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 WDFY3Q8IZQ1 3526 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 A0A0J9YYE9 177 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 PSMD11O00231 422 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 AGRPO00253 132 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TNFRSF10CO14798 259 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 INPP4BO15327 924 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 RRP8O43159 456 aaKnown RBP10.42□□□□□ -0.74
CAPN1-225ENST00000533704 FZD6O60353 706 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 MTA2O94776 668 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TRBC1P01850 177 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SLC4A1P02730 911 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 HOXC4P09017 264 aaPredicted RBP10.42□□□□□ -0.74
CAPN1-225ENST00000533704 CES1P23141 567 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ITPKBP27987 946 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TRIM23P36406 574 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ABCG1P45844 678 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 POLD2P49005 469 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 CDK3Q00526 305 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 PPIDQ08752 370 aaKnown RBP10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ZBTB17Q13105 803 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SARM1Q6SZW1 724 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 MFSD7Q6UXD7 560 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 KDELC2Q7Z4H8 507 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 PDZD3Q86UT5 571 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TRIM74Q86UV6 250 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SFTPA2Q8IWL1 248 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ARRDC2Q8TBH0 407 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 FGF11Q92914 225 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SCAMP4Q969E2 229 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 CRELD1Q96HD1 420 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 AGAP3Q96P47 875 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TDRD1Q9BXT4 1180 aaKnown RBP10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TEX101Q9BY14 249 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 ABCG8Q9H221 673 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 GOLPH3Q9H4A6 298 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 KCTD5Q9NXV2 234 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
CAPN1-225ENST00000533704 AMACRQ9UHK6 382 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 INTUQ9ULD6 942 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 TFR2Q9UP52 801 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SATB2Q9UPW6 733 aa10.42□□□□□ -0.74
CAPN1-225ENST00000533704 SCN8AQ9UQD0 1980 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 C1orf232A0A0U1RR37 186 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 CAPN8A6NHC0 703 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 C3orf70A6NLC5 250 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 CLDN7O95471 211 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 ASMTLO95671 621 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 RPLP0P05388 317 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 CEACAM5P06731 702 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 ZNF30P17039 623 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 AK4P27144 223 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 RBMS1P29558 406 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 EIF2S3P41091 472 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 SLC1A1P43005 524 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 CCL7P80098 99 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 IFI35P80217 286 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 ILF3Q12906 894 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 BIRC2Q13490 618 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 GALNT3Q14435 633 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 PDK1Q15118 436 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 SPA17Q15506 151 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 PCSK7Q16549 785 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 TBC1D25Q3MII6 688 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 KAZNQ674X7 775 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 SLC9A4Q6AI14 798 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 ALG1LQ6GMV1 187 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 SLC30A9Q6PML9 568 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 MARK2Q7KZI7 788 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 TECPR1Q7Z6L1 1165 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 CCDC50Q8IVM0 306 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 FATE1Q969F0 183 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 GFM1Q96RP9 751 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 RIOK2Q9BVS4 552 aaKnown RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 GSDMCQ9BYG8 508 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 FRMD8Q9BZ67 464 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-225ENST00000533704 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 POLR1BQ9H9Y6 1135 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 EPB41L5Q9HCM4 733 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
CAPN1-225ENST00000533704 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms