RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PCDHB9Q9Y5E1 797 aa28.43■■■□□ 2.14
SAMD1-202ENST00000533683 A0A0U1RQS6 177 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 MEI4A8MW99 385 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 SNUPNO95149 360 aaKnown RBP28.42■■■□□ 2.14
SAMD1-202ENST00000533683 ADH1AP07327 375 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 SLC22A9Q8IVM8 553 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 CPXM2Q8N436 756 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 CLP1Q92989 425 aaKnown RBP28.42■■■□□ 2.14
SAMD1-202ENST00000533683 TCF12Q99081 682 aa28.42■■■□□ 2.14
SAMD1-202ENST00000533683 C2orf49Q9BVC5 232 aaPredicted RBP28.42■■■□□ 2.14
SAMD1-202ENST00000533683 TRAV19A0A0A6YYK7 116 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 FMO4P31512 558 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 RAP1GDS1P52306 607 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 COPAP53621 1224 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 SH2D4BQ5SQS7 431 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 RPS27LQ71UM5 84 aaKnown RBP28.41■■■□□ 2.14
SAMD1-202ENST00000533683 CMTM5Q96DZ9 223 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 TM6SF2Q9BZW4 377 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 BPIFA1Q9NP55 256 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 ZNF510Q9Y2H8 683 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 MED16Q9Y2X0 877 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 SMAD6O43541 496 aaKnown RBP28.41■■■□□ 2.14
SAMD1-202ENST00000533683 SP100P23497 879 aaPredicted RBP28.41■■■□□ 2.14
SAMD1-202ENST00000533683 PDAP1Q13442 181 aaKnown RBP28.41■■■□□ 2.14
SAMD1-202ENST00000533683 RALGPS1Q5JS13 557 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 TPGS1Q6ZTW0 290 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 PIANPQ8IYJ0 282 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 STON2Q8WXE9 905 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 CORO1BQ9BR76 489 aa28.41■■■□□ 2.14
SAMD1-202ENST00000533683 VGLL3A8MV65 326 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 STX7O15400 261 aaKnown RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 NDUFS3O75489 264 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 MC4RP32245 332 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 KLF10Q13118 480 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 KPNB1Q14974 876 aaKnown RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 NAA25Q14CX7 972 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 PDCD2Q16342 344 aaPredicted RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 KHDC1Q4VXA5 237 aaKnown RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 RETSATQ6NUM9 610 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 ACAD11Q709F0 780 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 SLC22A17Q8WUG5 538 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 WDR60Q8WVS4 1066 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 SLC46A2Q9BY10 475 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 CDYLQ9Y232 598 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 DOCK6Q96HP0 2047 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 TM7SF2O76062 418 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 CSPG5O95196 566 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 MPPE1Q53F39 396 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 SETMARQ53H47 684 aaPredicted RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 MPP7Q5T2T1 576 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 WLSQ5T9L3 541 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 PSAPL1Q6NUJ1 521 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 ELMOD1Q8N336 334 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 RYBPQ8N488 228 aaPredicted RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 THTPAQ9BU02 230 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 SMG9Q9H0W8 520 aaKnown RBP28.4■■■□□ 2.14
SAMD1-202ENST00000533683 GTSE1Q9NYZ3 720 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 HACD3Q9P035 362 aa28.4■■■□□ 2.14
SAMD1-202ENST00000533683 SRP72O76094 671 aaKnown RBP28.39■■■□□ 2.14
SAMD1-202ENST00000533683 IMPDH1P20839 514 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 ERVFC1P60507 584 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 AP1S1P61966 158 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 SULT2A1Q06520 285 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 OR6K2Q8NGY2 324 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 CLPTM1LQ96KA5 538 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 FAM161BQ96MY7 647 aa28.39■■■□□ 2.14
SAMD1-202ENST00000533683 LOC100653049A0A140TA62 436 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 F8W8V4 182 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 H3BMM5 538 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 LEFTY2O00292 366 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 CCL16O15467 120 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 KRT34O76011 436 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 RHOBTB1O94844 696 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 PRAMEF12O95522 483 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 EPHB1P54762 984 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 SLC25A3Q00325 362 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 LMAN2Q12907 356 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 PEX6Q13608 980 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 FRMD7Q6ZUT3 714 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 CAMK1DQ8IU85 385 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 SCUBE1Q8IWY4 988 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 ACDQ96AP0 544 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 TCF25Q9BQ70 676 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 TNFRSF12AQ9NP84 129 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 TAS2R13Q9NYV9 303 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 CXXC1Q9P0U4 656 aaPredicted RBP28.38■■■□□ 2.13
SAMD1-202ENST00000533683 FAM50BQ9Y247 325 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 FNDC3AQ9Y2H6 1198 aaKnown RBP28.38■■■□□ 2.13
SAMD1-202ENST00000533683 INSL6Q9Y581 213 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 ANP32DO95626 131 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 EZRP15311 586 aaKnown RBP28.38■■■□□ 2.13
SAMD1-202ENST00000533683 PREPLQ4J6C6 727 aaPredicted RBP28.38■■■□□ 2.13
SAMD1-202ENST00000533683 ACSBG2Q5FVE4 666 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 ULK2Q8IYT8 1036 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 ENDOVQ8N8Q3 282 aaKnown RBP28.38■■■□□ 2.13
SAMD1-202ENST00000533683 BIRC8Q96P09 236 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 GCNAQ96QF7 691 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 CCDC28BQ9BUN5 200 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 CCDC68Q9H2F9 335 aa28.38■■■□□ 2.13
SAMD1-202ENST00000533683 GSTO2Q9H4Y5 243 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms