RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 WASH4PA8MWX3 477 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 AZIN1O14977 448 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 ARPC2O15144 300 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 CDK14O94921 469 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 PEX11BO96011 259 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 GFAPP14136 432 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 CD1DP15813 335 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 UGT1A6P19224 532 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 FDXRP22570 491 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 SLC6A2P23975 617 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 RPL10P27635 214 aaKnown RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 ENTPD1P49961 510 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 NRG1Q02297 640 aaPredicted RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 FAM171BQ6P995 826 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 C3orf58Q8NDZ4 430 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 TRPV3Q8NET8 790 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 TWIST2Q8WVJ9 160 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 FATE1Q969F0 183 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 TINF2Q9BSI4 451 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 SMOC2Q9H3U7 446 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 SDR39U1Q9NRG7 319 aaPredicted RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 PCDHA9Q9Y5H5 950 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 PIP5K1BO14986 540 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 TREHO43280 583 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 DCKP27707 260 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 CCR1P32246 355 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 MRPL19P49406 292 aaKnown RBP16.61■□□□□ 0.25
CTSB-228ENST00000533455 CLCNKBP51801 687 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 VPS26BQ4G0F5 336 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 ELMSAN1Q6PJG2 1045 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 TSPEARQ8WU66 669 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 LRRC58Q96CX6 371 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 TRIM54Q9BYV2 358 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 IL1RL2Q9HB29 575 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 SLC52A3Q9NQ40 469 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 EGFL7Q9UHF1 273 aa16.61■□□□□ 0.25
CTSB-228ENST00000533455 ZFC3H1O60293 1989 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 FAM149AA5PLN7 773 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 TRIM64BA6NI03 449 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 HAS3O00219 553 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 ZSCAN9O15535 394 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 HOXB8P17481 243 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 LBPP18428 481 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 OXTRP30559 389 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 GRB14Q14449 540 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 GRB7Q14451 532 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 RAB44Q7Z6P3 723 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 DPP9Q86TI2 863 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 PTRH1Q86Y79 214 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 PTGR2Q8N8N7 351 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 SMYD1Q8NB12 490 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 PAPD5Q8NDF8 572 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 YTHDF1Q9BYJ9 559 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 OAZ3Q9UMX2 235 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 RNF103-CHMP3A0A140T963 221 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 TCRBV5S2A0A599 114 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 MEIS3P2A8K0S8 358 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 MAGEB3O15480 346 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 BDNFP23560 247 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 HMOX2P30519 316 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 CAPGP40121 348 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 PSEN2P49810 448 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 SUOXP51687 545 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 CDH13P55290 713 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 BLOC1S3Q6QNY0 202 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 ABRAXAS1Q6UWZ7 409 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 PATL1Q86TB9 770 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 PIM3Q86V86 326 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 ZNF354CQ86Y25 554 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 HDAC10Q969S8 669 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 TMEM125Q96AQ2 219 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 CXorf21Q9HAI6 301 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 POPDC3Q9HBV1 291 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 MID1IP1Q9NPA3 183 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 RGS18Q9NS28 235 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 ABCC13Q9NSE7 274 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 MARCH4Q9P2E8 410 aaPredicted RBP16.6■□□□□ 0.25
CTSB-228ENST00000533455 CDC14AQ9UNH5 594 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 DOCK4Q8N1I0 1966 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 MYO16Q9Y6X6 1858 aa16.6■□□□□ 0.25
CTSB-228ENST00000533455 BPTFQ12830 3046 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 E9PAM4 449 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 CLOCKO15516 846 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 SNAP91O60641 907 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 VPS4BO75351 444 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 THP07101 528 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 MMP2P08253 660 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 VARSP26640 1264 aaKnown RBP16.59■□□□□ 0.25
CTSB-228ENST00000533455 RFC2P35250 354 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 ARSDP51689 593 aa16.59■□□□□ 0.25
CTSB-228ENST00000533455 CAPRIN1Q14444 709 aaKnown RBP16.59■□□□□ 0.25
CTSB-228ENST00000533455 USP51Q70EK9 711 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms