RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZSWIM9Q86XI8 627 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 UMODL1-AS1Q8N2C9 162 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 ESX1Q8N693 406 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 EMC1Q8N766 993 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 EFCAB3Q8N7B9 438 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 OR10G6Q8NH81 332 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-223ENST00000533079 NUS1Q96E22 293 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
CAPN1-223ENST00000533079 FRMD8Q9BZ67 464 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-223ENST00000533079 HSD3B7Q9H2F3 369 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 CATSPERBQ9H7T0 1116 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 RWDD2AQ9UIY3 292 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 AJAP1Q9UKB5 411 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-223ENST00000533079 UNC13CQ8NB66 2214 aa12.42□□□□□ -0.42
CAPN1-223ENST00000533079 A0A1W2PQ67 120 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 LRRC10BA6NIK2 292 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 C2CD4BA6NLJ0 364 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 PPM1DO15297 605 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 FGF10O15520 208 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-223ENST00000533079 RFPL1O75677 317 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 DLGAP3O95886 979 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 CEACAM5P06731 702 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 IVLP07476 585 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 PNMA6AP0CW24 399 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-223ENST00000533079 GM2AP17900 193 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 NFKBIAP25963 317 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 HTR7P34969 479 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 GNPDA1P46926 289 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 MLLT10P55197 1068 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 HDAC4P56524 1084 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 BCL2L1Q07817 233 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 C15orf59Q2T9L4 293 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-223ENST00000533079 NKAIN2Q5VXU1 208 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 ASB18Q6ZVZ8 466 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 ARHGAP22Q7Z5H3 698 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 ZNF677Q86XU0 584 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 CCDC185Q8N715 623 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 RXFP2Q8WXD0 754 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 TMEM9Q9P0T7 183 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 SUFUQ9UMX1 484 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 SLC17A4Q9Y2C5 497 aa12.41□□□□□ -0.42
CAPN1-223ENST00000533079 TEX33O43247 280 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 CBFA2T2O43439 604 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 BUB1BO60566 1050 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 PRAMEF11O60813 436 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 DDAH2O95865 285 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 AK4P27144 223 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 NDST2P52849 883 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 GSCP56915 257 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 CDK3Q00526 305 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 CTBSQ01459 385 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 LRP8Q14114 963 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 ACOX1Q15067 660 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 C2CD6Q53TS8 623 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 C16orf46Q6P387 395 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 TIPARPQ7Z3E1 657 aaKnown RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 PAF1Q8N7H5 531 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 PATE1Q8WXA2 126 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 COQ10AQ96MF6 247 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 FANCLQ9NW38 375 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 POLHQ9Y253 713 aa12.4□□□□□ -0.42
CAPN1-223ENST00000533079 ZNF106Q9H2Y7 1883 aaKnown RBP12.4□□□□□ -0.42
CAPN1-223ENST00000533079 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
CAPN1-223ENST00000533079 PSMD11O00231 422 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 POLR1CO15160 346 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-223ENST00000533079 RECKO95980 971 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 MMP8P22894 467 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 MPSTP25325 297 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 ADCY8P40145 1251 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 ACTR1BP42025 376 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 PMS2P54278 862 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 EPHA4P54764 986 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 ACTR1AP61163 376 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 AP1S1P61966 158 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 FANCCQ00597 558 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAPN1-223ENST00000533079 RAB6CQ53S08 254 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 TAF3Q5VWG9 929 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 SRLQ86TD4 932 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 UNC5BQ8IZJ1 945 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-223ENST00000533079 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 SLC38A3Q99624 504 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 CINPQ9BW66 212 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms