RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 MMRN1Q13201 1228 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 HLTFQ14527 1009 aaKnown RBP eCLIP17.8■□□□□ 0.44
PCF11-206ENST00000533018 PTPRRQ15256 657 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 RALGPS1Q5JS13 557 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 Q6ZVL8 140 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 TSPAN33Q86UF1 283 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 ZDHHC1Q8WTX9 485 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 DTD2Q96FN9 168 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 SEMA3CQ99985 751 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 TEX101Q9BY14 249 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 GSDMCQ9BYG8 508 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 CD84Q9UIB8 345 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
PCF11-206ENST00000533018 LOXL2Q9Y4K0 774 aa17.8■□□□□ 0.44
PCF11-206ENST00000533018 A0A0U1RQS6 177 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 RHPN2P1A8MT19 583 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 PSMD11O00231 422 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 NUDT21O43809 227 aaKnown RBP17.79■□□□□ 0.44
PCF11-206ENST00000533018 CYP1A2P05177 515 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 CEACAM5P06731 702 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 CD48P09326 243 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 PNLIPP16233 465 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 CCKBRP32239 447 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 GPR1P46091 355 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 SKOR1P84550 965 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 CDK3Q00526 305 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 CLN3Q13286 438 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 AMZ1Q400G9 498 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 MAP9Q49MG5 647 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 ZFYVE27Q5T4F4 411 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 PHF19Q5T6S3 580 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 ALKBH5Q6P6C2 394 aaKnown RBP17.79■□□□□ 0.44
PCF11-206ENST00000533018 DOK6Q6PKX4 331 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 SPRED1Q7Z699 444 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 KCTD6Q8NC69 237 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 GPBAR1Q8TDU6 330 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 SPOCK2Q92563 424 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 POLR1EQ9GZS1 481 aaKnown RBP17.79■□□□□ 0.44
PCF11-206ENST00000533018 SPATS2LQ9NUQ6 558 aaKnown RBP17.79■□□□□ 0.44
PCF11-206ENST00000533018 RCOR3Q9P2K3 495 aaPredicted RBP17.79■□□□□ 0.44
PCF11-206ENST00000533018 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 SUFUQ9UMX1 484 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 AHCTF1Q8WYP5 2266 aa17.79■□□□□ 0.44
PCF11-206ENST00000533018 MAP3K6O95382 1288 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 PDHA1P08559 390 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 AK4P27144 223 aaPredicted RBP17.78■□□□□ 0.44
PCF11-206ENST00000533018 ALDH4A1P30038 563 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 POLD2P49005 469 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 MAZP56270 477 aaKnown RBP17.78■□□□□ 0.44
PCF11-206ENST00000533018 KIAA1614Q5VZ46 1190 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 SLC30A9Q6PML9 568 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 PCSK4Q6UW60 755 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 ZNF605Q86T29 641 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 ZNF843Q8N446 348 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 ZNF564Q8TBZ8 553 aaPredicted RBP17.78■□□□□ 0.44
PCF11-206ENST00000533018 CCNL2Q96S94 520 aaPredicted RBP17.78■□□□□ 0.44
PCF11-206ENST00000533018 CMKLR1Q99788 373 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 TAAR2Q9P1P5 351 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 CTTNBP2NLQ9P2B4 639 aa17.78■□□□□ 0.44
PCF11-206ENST00000533018 ZNF462Q96JM2 2506 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 SCN8AQ9UQD0 1980 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 K7ENP7 123 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 ZW10O43264 779 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 MFSD11O43934 449 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 FUCA1P04066 466 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 FGF1P05230 155 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 ITIH1P19827 911 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 IL4RP24394 825 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 PBX1P40424 430 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 GARSP41250 739 aaKnown RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 MAPK10P53779 464 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 OR1D5P58170 312 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 ATP13A4Q4VNC1 1196 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 LRRC66Q68CR7 880 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 TIGD7Q6NT04 549 aaPredicted RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 INO80CQ6PI98 192 aaPredicted RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 PIM3Q86V86 326 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 NRROSQ86YC3 692 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 TEX26Q8N6G2 289 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 PIH1D2Q8WWB5 315 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 AP2M1Q96CW1 435 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 IQCDQ96DY2 449 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 MCCC1Q96RQ3 725 aaPredicted RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 FRMD8Q9BZ67 464 aaPredicted RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 RDH14Q9HBH5 336 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 HAUS2Q9NVX0 235 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 RBM22Q9NW64 420 aaKnown RBP eCLIP17.77■□□□□ 0.44
PCF11-206ENST00000533018 TRNAU1APQ9NX07 287 aaKnown RBP17.77■□□□□ 0.44
PCF11-206ENST00000533018 PCDHGA7Q9Y5G6 932 aa17.77■□□□□ 0.44
PCF11-206ENST00000533018 ECEL1O95672 775 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 PPM1FP49593 454 aaPredicted RBP17.76■□□□□ 0.43
PCF11-206ENST00000533018 CTBSQ01459 385 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 ZFP36L1Q07352 338 aaKnown RBP17.76■□□□□ 0.43
PCF11-206ENST00000533018 PEX6Q13608 980 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 DPYSL3Q14195 570 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 LY6DQ14210 128 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 ANKRD20A8PQ5CZ79 823 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms