RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ZNF830Q96NB3 372 aaPredicted RBP18.94■□□□□ 0.62
SSH3-209ENST00000532600 BBC3Q96PG8 261 aaPredicted RBP18.94■□□□□ 0.62
SSH3-209ENST00000532600 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
SSH3-209ENST00000532600 GOLPH3Q9H4A6 298 aa18.94■□□□□ 0.62
SSH3-209ENST00000532600 WDR26Q9H7D7 661 aa18.94■□□□□ 0.62
SSH3-209ENST00000532600 ASCL3Q9NQ33 180 aa18.94■□□□□ 0.62
SSH3-209ENST00000532600 A0A0A6YYK5 440 aaPredicted RBP18.93■□□□□ 0.62
SSH3-209ENST00000532600 NOBOXO60393 691 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 SOD1P00441 154 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 HLA-DQB2P05538 268 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 KDELR1P24390 212 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 CCNCP24863 283 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 HADHBP55084 474 aaKnown RBP18.93■□□□□ 0.62
SSH3-209ENST00000532600 ARMC12Q5T9G4 340 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 OGFOD3Q6PK18 319 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 RBM44Q6ZP01 1051 aaKnown RBP18.93■□□□□ 0.62
SSH3-209ENST00000532600 HEATR4Q86WZ0 1026 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 SDR16C5Q8N3Y7 309 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.93■□□□□ 0.62
SSH3-209ENST00000532600 ATL2Q8NHH9 583 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 NSMCE1Q8WV22 266 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 FATE1Q969F0 183 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 POLR1BQ9H9Y6 1135 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 CYP4F12Q9HCS2 524 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 RBM22Q9NW64 420 aaKnown RBP eCLIP18.93■□□□□ 0.62
SSH3-209ENST00000532600 DTLQ9NZJ0 730 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 DOLKQ9UPQ8 538 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 SATB2Q9UPW6 733 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 HYOU1Q9Y4L1 999 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 ST14Q9Y5Y6 855 aa18.93■□□□□ 0.62
SSH3-209ENST00000532600 A0A1W2PQM1 296 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 PRSS38A1L453 326 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 BTNL10A8MVZ5 291 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 TCEA3O75764 348 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 IPO7O95373 1038 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 CEACAM5P06731 702 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 KRT7P08729 469 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 CYP2A6P11509 494 aaPredicted RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 MYCLP1P12525 358 aaPredicted RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 ACTN2P35609 894 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 ABCG1P45844 678 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 PTSQ03393 145 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 IFI16Q16666 785 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 KIAA1328Q86T90 577 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 NRROSQ86YC3 692 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 PLD5Q8N7P1 536 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 TPCN2Q8NHX9 752 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 RNF157Q96PX1 679 aa18.92■□□□□ 0.62
SSH3-209ENST00000532600 FRMD8Q9BZ67 464 aaPredicted RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 POLR1EQ9GZS1 481 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 LUC7LQ9NQ29 371 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 SMG1Q96Q15 3661 aaKnown RBP18.92■□□□□ 0.62
SSH3-209ENST00000532600 A0A0J9YYE9 177 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 PSMD11O00231 422 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 TRBC1P01850 177 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 MMP2P08253 660 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CCNB1P14635 433 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 ARHGAP25P42331 645 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 NOP2P46087 812 aaKnown RBP18.91■□□□□ 0.62
SSH3-209ENST00000532600 CCL7P80098 99 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CDK3Q00526 305 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 ITKQ08881 620 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CCDC173Q0VFZ6 552 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 C3orf38Q5JPI3 329 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 LRRC66Q68CR7 880 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 TAF8Q7Z7C8 310 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 B3GNT8Q7Z7M8 397 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CNTD1Q8N815 330 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 SCG3Q8WXD2 468 aaKnown RBP18.91■□□□□ 0.62
SSH3-209ENST00000532600 LGMNQ99538 433 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 TDRD1Q9BXT4 1180 aaKnown RBP18.91■□□□□ 0.62
SSH3-209ENST00000532600 ABCG8Q9H221 673 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 PRORYQ9H606 182 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CD84Q9UIB8 345 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 CHKBQ9Y259 395 aa18.91■□□□□ 0.62
SSH3-209ENST00000532600 ARHGEF17Q96PE2 2063 aaPredicted RBP18.91■□□□□ 0.62
SSH3-209ENST00000532600 KELP23276 732 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 TEAD1P28347 426 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 POLD2P49005 469 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 TLE3Q04726 772 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 DPTQ07507 201 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 ZBTB17Q13105 803 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 TIGD7Q6NT04 549 aaPredicted RBP18.9■□□□□ 0.62
SSH3-209ENST00000532600 USP45Q70EL2 814 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 MAP7D3Q8IWC1 876 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 SPACA3Q8IXA5 215 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 GPBAR1Q8TDU6 330 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 HDAC11Q96DB2 347 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 ZNF578Q96N58 590 aaPredicted RBP18.9■□□□□ 0.62
SSH3-209ENST00000532600 AGAP2Q99490 1192 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 SPATS2LQ9NUQ6 558 aaKnown RBP18.9■□□□□ 0.62
SSH3-209ENST00000532600 ATRXP46100 2492 aa18.9■□□□□ 0.62
SSH3-209ENST00000532600 COMTP21964 271 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 PPIDQ08752 370 aaKnown RBP18.89■□□□□ 0.61
SSH3-209ENST00000532600 HLTFQ14527 1009 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSH3-209ENST00000532600 CERCAMQ5T4B2 595 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 SLC9A4Q6AI14 798 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 IGF2-ASQ6U949 168 aa18.89■□□□□ 0.61
SSH3-209ENST00000532600 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms