RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TTI1O43156 1089 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 CRTAMO95727 393 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 WNT1P04628 370 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 SYPP08247 313 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 THEGLP0DJG4 465 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TPH1P17752 444 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TPSB2P20231 275 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 RABIFP47224 123 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 SPINT3P49223 89 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 SARNPP82979 210 aaKnown RBP22.24■■□□□ 1.15
LRRK1-208ENST00000532029 MTM1Q13496 603 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TAF1AQ15573 450 aaPredicted RBP22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TPSAB1Q15661 275 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TCEAL6Q6IPX3 200 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 RFLNAQ6ZTI6 216 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 ZNF765Q7L2R6 523 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 MAATS1Q7Z4T9 603 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TTC30BQ8N4P2 665 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 GPR161Q8N6U8 529 aaKnown RBP22.24■■□□□ 1.15
LRRK1-208ENST00000532029 MNS1Q8NEH6 495 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 BRSK1Q8TDC3 778 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 TCEAL3Q969E4 200 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 AP2M1Q96CW1 435 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 BMFQ96LC9 184 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 ABCG8Q9H221 673 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 CAPN10Q9HC96 672 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 PARD6AQ9NPB6 346 aa22.24■■□□□ 1.15
LRRK1-208ENST00000532029 PIH1D1Q9NWS0 290 aaKnown RBP22.24■■□□□ 1.15
LRRK1-208ENST00000532029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.24■■□□□ 1.15
LRRK1-208ENST00000532029 AP3B1O00203 1094 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 TLR4O00206 839 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 TOR1BO14657 336 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 FOXD2O60548 495 aaPredicted RBP22.23■■□□□ 1.15
LRRK1-208ENST00000532029 HMGCLP35914 325 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 IRX4P78413 519 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 SF3A2Q15428 464 aaKnown RBP22.23■■□□□ 1.15
LRRK1-208ENST00000532029 RAET1GQ6H3X3 334 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 ESRP1Q6NXG1 681 aaKnown RBP22.23■■□□□ 1.15
LRRK1-208ENST00000532029 Q6ZSR6 202 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 OR13H1Q8NG92 308 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 EID2BQ96D98 161 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 CDH19Q9H159 772 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 FAM83DQ9H4H8 585 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 CASS4Q9NQ75 786 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 ANKRD6Q9Y2G4 727 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 PKP3Q9Y446 797 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 LRRK1Q38SD2 2015 aa22.23■■□□□ 1.15
LRRK1-208ENST00000532029 STX7O15400 261 aaKnown RBP22.22■■□□□ 1.15
LRRK1-208ENST00000532029 TSHRP16473 764 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 GRIA1P42261 906 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 MAGEA6P43360 314 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 PFN3P60673 137 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 YPEL5P62699 121 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 PDE1BQ01064 536 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 DPTQ07507 201 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 GRIK2Q13002 908 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 SEPT6Q14141 434 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 INPP5AQ14642 412 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 KCNJ11Q14654 390 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 PNCKQ6P2M8 343 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 DCP2Q8IU60 420 aaKnown RBP22.22■■□□□ 1.15
LRRK1-208ENST00000532029 PLA2G15Q8NCC3 412 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 CPT1BQ92523 772 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 SCAMP4Q969E2 229 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 TRIM51Q9BSJ1 452 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 RIOK2Q9BVS4 552 aaKnown RBP22.22■■□□□ 1.15
LRRK1-208ENST00000532029 ZDHHC5Q9C0B5 715 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 BPIFA1Q9NP55 256 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 FSCN3Q9NQT6 498 aa22.22■■□□□ 1.15
LRRK1-208ENST00000532029 TCRBV7S3A2A0A539 114 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 FAM187AA6NFU0 413 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ESPNB1AK53 854 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ARHGAP33O14559 1287 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 BUD23O43709 281 aaKnown RBP22.21■■□□□ 1.15
LRRK1-208ENST00000532029 PYGLP06737 847 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ENGP17813 658 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 LPOP22079 712 aaPredicted RBP22.21■■□□□ 1.15
LRRK1-208ENST00000532029 GPR1P46091 355 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 THOP1P52888 689 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ATXN3P54252 364 aaPredicted RBP22.21■■□□□ 1.15
LRRK1-208ENST00000532029 NXPH1P58417 271 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 MSLNQ13421 630 aaPredicted RBP22.21■■□□□ 1.15
LRRK1-208ENST00000532029 POU6F1Q14863 301 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 KIF19Q2TAC6 998 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ZDHHC20Q5W0Z9 365 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ALS2CLQ60I27 953 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 IL27RAQ6UWB1 636 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 PRR23CQ6ZRP0 262 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 PCGF5Q86SE9 256 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 NLRP8Q86W28 1048 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 PPIL6Q8IXY8 311 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 GTPBP2Q9BX10 602 aaKnown RBP22.21■■□□□ 1.15
LRRK1-208ENST00000532029 GDF3Q9NR23 364 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 IL17CQ9P0M4 197 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 SNX11Q9Y5W9 270 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 ARL5AQ9Y689 179 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 GPR179Q6PRD1 2367 aa22.21■■□□□ 1.15
LRRK1-208ENST00000532029 DNALI1O14645 258 aaPredicted RBP22.2■■□□□ 1.14
LRRK1-208ENST00000532029 ZNF500O60304 480 aaPredicted RBP22.2■■□□□ 1.14
LRRK1-208ENST00000532029 PPFIA2O75334 1257 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms