RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.63■□□□□ 0.41
CTSB-222ENST00000531551 WNT9AO14904 365 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 GPR37L1O60883 481 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 RECQL5O94762 991 aaPredicted RBP17.63■□□□□ 0.41
CTSB-222ENST00000531551 PAK4O96013 591 aaPredicted RBP17.63■□□□□ 0.41
CTSB-222ENST00000531551 POLBP06746 335 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 TDGF1P13385 188 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 HOXA6P31267 233 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 ZNF140P52738 457 aaPredicted RBP17.63■□□□□ 0.41
CTSB-222ENST00000531551 SGCGQ13326 291 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 KIAA1161Q6NSJ0 714 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 HORMAD1Q86X24 394 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 FBXO4Q9UKT5 387 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 RAB21Q9UL25 225 aa17.63■□□□□ 0.41
CTSB-222ENST00000531551 ZDBF2Q9HCK1 2354 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 CCDC163A0A0D9SF12 145 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 FAM237BA0A1B0GVD1 139 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 PSMD11O00231 422 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 BPIP17213 487 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 SPINT3P49223 89 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 RPL6Q02878 288 aaKnown RBP17.62■□□□□ 0.41
CTSB-222ENST00000531551 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 ANGPT1Q15389 498 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 ANKRD20A4Q4UJ75 823 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 NEK5Q6P3R8 708 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 WDR5BQ86VZ2 330 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 NAT9Q9BTE0 207 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 PHACTR1Q9C0D0 580 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 SUDS3Q9H7L9 328 aaPredicted RBP17.62■□□□□ 0.41
CTSB-222ENST00000531551 MRM3Q9HC36 420 aaKnown RBP17.62■□□□□ 0.41
CTSB-222ENST00000531551 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
CTSB-222ENST00000531551 MBD1Q9UIS9 605 aaPredicted RBP17.62■□□□□ 0.41
CTSB-222ENST00000531551 SLC31A1O15431 190 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 HADHAP40939 763 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 PRAMEP78395 509 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 KYNUQ16719 465 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 UNC5AQ6ZN44 842 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 MICALCLQ6ZW33 695 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 CCNJLQ8IV13 435 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 GPR26Q8NDV2 337 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 OR13J1Q8NGT2 312 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 OR6P1Q8NGX9 317 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■□□□□ 11
CTSB-222ENST00000531551 SNX19Q92543 992 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 SCAMP4Q969E2 229 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 NUS1Q96E22 293 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 TBATAQ96M53 351 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 COQ10AQ96MF6 247 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 FCRL3Q96P31 734 aaPredicted RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 MYOCQ99972 504 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 SLC17A9Q9BYT1 436 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 CDC42EP4Q9H3Q1 356 aaKnown RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 NLE1Q9NVX2 485 aaPredicted RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 IL1RAPL1Q9NZN1 696 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 USP1O94782 785 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 GM2AP17900 193 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 PAMP19021 973 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 BCKDHBP21953 392 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 SSTR1P30872 391 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 SPAM1P38567 509 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 ARSDP51689 593 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 SRSF5Q13243 272 aaKnown RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 CRYMQ14894 314 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 FAM151BQ6UXP7 276 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 TECPR1Q7Z6L1 1165 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 TMEM135Q86UB9 458 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 CBARPQ8N350 705 aaPredicted RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 HDAC10Q969S8 669 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 DTD2Q96FN9 168 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 CDKN2AIPNLQ96HQ2 116 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 C1QTNF1Q9BXJ1 281 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 FAM83DQ9H4H8 585 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 VPS37BQ9H9H4 285 aa17.61■□□□□ 0.41
CTSB-222ENST00000531551 PPANQ9NQ55 473 aaKnown RBP17.61■□□□□ 0.41
CTSB-222ENST00000531551 RPP40O75818 363 aaKnown RBP17.6■□□□□ 0.41
CTSB-222ENST00000531551 VAPBO95292 243 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 TTC4O95801 387 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 ZNF284Q2VY69 593 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 TMEM259Q4ZIN3 620 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 KIAA0895LQ68EN5 471 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 SLC36A4Q6YBV0 504 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTSB-222ENST00000531551 AP2M1Q96CW1 435 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 SEMA4AQ9H3S1 761 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 FZD3Q9NPG1 666 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 TREX1Q9NSU2 369 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 NINJ2Q9NZG7 142 aa17.6■□□□□ 0.41
CTSB-222ENST00000531551 UQCRHLA0A096LP55 91 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 GLYATL1P3A0A0U1RQE8 302 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 OR51F1A6NGY5 319 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 GOLGA8KD6RF30 607 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 GOLGA8TH3BQL2 631 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 ACSL3O95573 720 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 UQCRHP07919 91 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 MC4RP32245 332 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 PMS2P54278 862 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 FGL2Q14314 439 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 SPANXN3Q5MJ09 141 aa17.59■□□□□ 0.41
CTSB-222ENST00000531551 C3orf62Q6ZUJ4 267 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms