RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 DLGAP2Q9P1A6 1054 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 FBXO5Q9UKT4 447 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 ANKRD36A6QL64 1941 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 MYLKQ15746 1914 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 COPEO14579 308 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 SPAG7O75391 227 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 LSP1P33241 339 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 HMGCLP35914 325 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 ABL2P42684 1182 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 SLC1A2P43004 574 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 CCT5P48643 541 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 BRAT1Q6PJG6 821 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 AFTPHQ6ULP2 937 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 SDCCAG8Q86SQ7 713 aaPredicted RBP21.2■□□□□ 0.98
VPS28-212ENST00000530836 ANKRD42Q8N9B4 389 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 HCAR2Q8TDS4 363 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 DENND1AQ8TEH3 1009 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 DYDC1Q8WWB3 177 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 CDKN2AIPNLQ96HQ2 116 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 VPS39Q96JC1 886 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 TBATAQ96M53 351 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 GPR22Q99680 433 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 IQCGQ9H095 443 aaKnown RBP21.2■□□□□ 0.98
VPS28-212ENST00000530836 CCDC134Q9H6E4 229 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 ZDHHC6Q9H6R6 413 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 GGT7Q9UJ14 662 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 PKP3Q9Y446 797 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 ZNF711Q9Y462 761 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 KCTD3Q9Y597 815 aa21.2■□□□□ 0.98
VPS28-212ENST00000530836 CAPN8A6NHC0 703 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 H7C0S8 307 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 STX7O15400 261 aaKnown RBP21.19■□□□□ 0.98
VPS28-212ENST00000530836 BNIP3LO60238 219 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 AHSGP02765 367 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 LEPRP48357 1165 aaKnown RBP21.19■□□□□ 0.98
VPS28-212ENST00000530836 CD151P48509 253 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 ARSDP51689 593 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 MPP2Q14168 576 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 GDPD4Q6W3E5 623 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 USP45Q70EL2 814 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 CILP2Q8IUL8 1156 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 TTC30BQ8N4P2 665 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 OR4K2Q8NGD2 314 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 OR13C4Q8NGS5 318 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 OR4L1Q8NH43 312 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 SCRN2Q96FV2 425 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 GPR63Q9BZJ6 419 aa21.19■□□□□ 0.98
VPS28-212ENST00000530836 TTC34A8MYJ7 566 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 PRRT4C9JH25 899 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 GOLGA8RI6L899 631 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 GOT2P00505 430 aaKnown RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 ALDOAP04075 364 aaKnown RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 MPOP05164 745 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 OGNP20774 298 aaKnown RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 TYK2P29597 1187 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 GKP32189 559 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 RPA3P35244 121 aaPredicted RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 MAGEA9P43362 315 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 IL9RQ01113 521 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CTBP1Q13363 440 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 SMAD1Q15797 465 aaKnown RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 PTAR1Q7Z6K3 402 aaPredicted RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 DENND6AQ8IWF6 608 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 DCLK2Q8N568 766 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 TMEM105Q8N8V8 129 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 SORCS1Q8WY21 1168 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 ZFYVE1Q9HBF4 777 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CATSPERZQ9NTU4 200 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CORO1CQ9ULV4 474 aaPredicted RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 STARD13Q9Y3M8 1113 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 ZDBF2Q9HCK1 2354 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 TPP1O14773 563 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 AURKAO14965 403 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 PFDN6O15212 129 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CD3EAPO15446 510 aaKnown RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 AVPR2P30518 371 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CRHR1P34998 444 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 MAGEA12P43365 314 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 OTUD6BQ8N6M0 293 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 VOPP1Q96AW1 172 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 TCF12Q99081 682 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 KLF6Q99612 283 aaPredicted RBP21.18■□□□□ 0.98
VPS28-212ENST00000530836 LRFN3Q9BTN0 628 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 CHRDQ9H2X0 955 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 IL36AQ9UHA7 158 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 DCDC2Q9UHG0 476 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 VPS9D1Q9Y2B5 631 aa21.18■□□□□ 0.98
VPS28-212ENST00000530836 EDDM13A0A1B0GTR0 161 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 CCDC162PA2VCL2 907 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 KIR2DL1P43626 348 aaPredicted RBP21.17■□□□□ 0.98
VPS28-212ENST00000530836 NEK3P51956 506 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 TMPRSS15P98073 1019 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 INSCQ1MX18 579 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 FASTKD1Q53R41 847 aaKnown RBP21.17■□□□□ 0.98
VPS28-212ENST00000530836 TTC19Q6DKK2 380 aaPredicted RBP21.17■□□□□ 0.98
VPS28-212ENST00000530836 LCA5Q86VQ0 697 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 MGARPQ8TDB4 240 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 KCNV2Q8TDN2 545 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 TCP10LQ8TDR4 215 aa21.17■□□□□ 0.98
VPS28-212ENST00000530836 MCCC1Q96RQ3 725 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms