RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 TBC1D3IA0A087WXS9 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3EA0A087X179 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3KA0A087X1G2 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3FA6NER0 549 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3LB9A6J9 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 KPNA5O15131 536 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3HP0C7X1 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 HOXB2P14652 356 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 GKP32189 559 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 VIPR1P32241 457 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CTSOP43234 321 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 SMAD4Q13485 552 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3GQ6DHY5 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3CQ6IPX1 549 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 PARM1Q6UWI2 310 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 MYLK4Q86YV6 388 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 TBC1D3Q8IZP1 549 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 AP2M1Q96CW1 435 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 MYEOVQ96EZ4 313 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CPEB1Q9BZB8 566 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 EML4Q9HC35 981 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 SNX15Q9NRS6 342 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 INTS10Q9NVR2 710 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 MYO18AQ92614 2054 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 A0A0J9YYE9 177 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 LOC285095A0A1B0GVY8 99 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CCDC162PA2VCL2 907 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TCP11X1B4DZS4 312 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CCL22O00626 93 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 PHGDHO43175 533 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 ATG13O75143 517 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 TRBC1P01850 177 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CPA3P15088 417 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 DRD1P21728 446 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 LSP1P33241 339 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 SUOXP51687 545 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 PTPN5P54829 565 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 IL2P60568 153 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 LRRC32Q14392 662 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 UBXN2BQ14CS0 331 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 N4BP2L1Q5TBK1 243 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 TMEM184AQ6ZMB5 413 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 SPATS2Q86XZ4 545 aaKnown RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 FAM217AQ8IXS0 508 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 HDDC3Q8N4P3 179 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 RAB42Q8N4Z0 105 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 OR14C36Q8NHC7 312 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 WFDC5Q8TCV5 224 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 SIPA1Q96FS4 1042 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 PHF7Q9BWX1 381 aaPredicted RBP7.4□□□□□ -1.22
BDNF-214ENST00000530786 TXLNGYQ9BZA5 131 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
BDNF-214ENST00000530786 C16orf96A6NNT2 1141 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 SUPT3HB4E1H0 165 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 SUPT3HO75486 399 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 GPC4O75487 556 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 SLC25A14O95258 325 aaPredicted RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 PKMP14618 531 aaKnown RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 PTGER3P43115 390 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 GLRBP48167 497 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 DBN1Q16643 649 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 HNRNPA1L2Q32P51 320 aaKnown RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 TEDDM1Q5T9Z0 273 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 STEAP4Q687X5 459 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 KCTD11Q693B1 232 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 VITQ6UXI7 678 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 RALGPS2Q86X27 583 aaPredicted RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 SLC41A1Q8IVJ1 513 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 RAB7BQ96AH8 199 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 TMEM159Q96B96 161 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 AGAP2Q99490 1192 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 LHX3Q9UBR4 397 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.23
BDNF-214ENST00000530786 SLC27A6Q9Y2P4 619 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 MTCH2Q9Y6C9 303 aa7.4□□□□□ -1.23
BDNF-214ENST00000530786 CXorf51AA0A1B0GTR3 108 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 WNT9AO14904 365 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 MAP3K13O43283 966 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 H2AFYO75367 372 aaKnown RBP7.39□□□□□ -1.23
BDNF-214ENST00000530786 FAM155BO75949 473 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 CLDN7O95471 211 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 ADH1BP00325 375 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 PRKCGP05129 697 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 LTA4HP09960 611 aaKnown RBP7.39□□□□□ -1.23
BDNF-214ENST00000530786 LINC00271P0C7V0 271 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 DGKAP23743 735 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 NTSR1P30989 418 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 SLC6A11P48066 632 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 ZNF234Q14588 700 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 NXNQ6DKJ4 435 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
BDNF-214ENST00000530786 FSTL4Q6MZW2 842 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 LRRC8EQ6NSJ5 796 aa7.39□□□□□ -1.23
BDNF-214ENST00000530786 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms