RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NOVP48745 357 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 NT5C2P49902 561 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 POLGP54098 1239 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 ALFQ53S48 1182 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 RETSATQ6NUM9 610 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF444Q8N0Y2 327 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 KLHDC9Q8NEP7 349 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 KCNJ9Q92806 393 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 SLC38A10Q9HBR0 1119 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 TMEM184CQ9NVA4 438 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF69Q9UC07 566 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 LAMP3Q9UQV4 416 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 CNPY2Q9Y2B0 182 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 Q9Y3F1 56 aa5.04□□□□□ -1.6
CSDE1-212ENST00000529046 LAMA2P24043 3122 aaKnown RBP5.04□□□□□ -1.6
CSDE1-212ENST00000529046 MROH7Q68CQ1 1323 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 LY6G6EA0A0G2JKS1 128 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CXorf65A6NEN9 183 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 KLK10O43240 276 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 GPAA1O43292 621 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 ZBED4O75132 1171 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 SNAI1O95863 264 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-212ENST00000529046 NDUFB10O96000 172 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 PYGLP06737 847 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 POLBP06746 335 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CLTBP09497 229 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 PRF1P14222 555 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 HNF1BP35680 557 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CPA2P48052 419 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 ARHGAP8P85298 464 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 RPE65Q16518 533 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 RUNDC3AQ59EK9 446 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 INTS11Q5TA45 600 aaKnown RBP5.03□□□□□ -1.6
CSDE1-212ENST00000529046 NAA35Q5VZE5 725 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 RNF144BQ7Z419 303 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 FAM160B2Q86V87 743 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 SETD9Q8NE22 299 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CHURC1Q8WUH1 139 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 NCSTNQ92542 709 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 EVI5LQ96CN4 794 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 SLF1Q9BQI6 1058 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 SCNM1Q9BWG6 230 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 NACAP1Q9BZK3 213 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CTDSP1Q9GZU7 261 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 UPF3AQ9H1J1 476 aaKnown RBP5.03□□□□□ -1.6
CSDE1-212ENST00000529046 THSD1Q9NS62 852 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 RNF146Q9NTX7 359 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 CLIP2Q9UDT6 1046 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 IPO11Q9UI26 975 aaKnown RBP5.03□□□□□ -1.6
CSDE1-212ENST00000529046 SLC25A13Q9UJS0 675 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 FBXO4Q9UKT5 387 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 PNMA2Q9UL42 364 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 GREB1LQ9C091 1923 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-212ENST00000529046 NAV1Q8NEY1 1877 aa5.03□□□□□ -1.6
CSDE1-212ENST00000529046 FRMPD3Q5JV73 1810 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 TCRBV7S3A2A0A539 114 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 MSI1O43347 362 aaKnown RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 KCNAB3O43448 404 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 UGDHO60701 494 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 CABYRO75952 493 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 DDAH2O95865 285 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 PGK2P07205 417 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 PRKCHP24723 683 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 GSTM2P28161 218 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 PSMC2P35998 433 aaKnown RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 STAT2P52630 851 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ACLYP53396 1101 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 POU5F1BQ06416 359 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ACVR2BQ13705 512 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 BYSLQ13895 437 aaKnown RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 SHHQ15465 462 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 TWIST1Q15672 202 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ALX1Q15699 326 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 PRICKLE4Q2TBC4 344 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 C5orf22Q49AR2 442 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ARL13AQ5H913 290 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 SH2D4BQ5SQS7 431 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 PRAMEF19Q5SWL8 479 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 NAPEPLDQ6IQ20 393 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 CCDC129Q6ZRS4 1044 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 Q7L0L9 218 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 BHLHA9Q7RTU4 235 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ANKRD13BQ86YJ7 626 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 TMEM217Q8N7C4 229 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 FAM133AQ8N9E0 248 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 HTRA1Q92743 480 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 BADQ92934 168 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 GLT1D1Q96MS3 346 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 GUCD1Q96NT3 240 aa5.02□□□□□ -1.61
CSDE1-212ENST00000529046 NPLQ9BXD5 320 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 CADM1Q9BY67 442 aaKnown RBP5.02□□□□□ -1.61
CSDE1-212ENST00000529046 ZNF304Q9HCX3 659 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 411.4 ms