RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CD48P09326 243 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 TMEM253P0C7T8 217 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 LHCGRP22888 699 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 CCKBRP32239 447 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 TMPRSS3P57727 454 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 SKOR1P84550 965 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 ITKQ08881 620 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 ILF3Q12906 894 aaKnown RBP eCLIP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 MMRN1Q13201 1228 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 CLPPQ16740 277 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 ASTE1Q2TB18 679 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 C14orf28Q4W4Y0 310 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 CERCAMQ5T4B2 595 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 NCBP2-AS2Q69YL0 99 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 CRTC1Q6UUV9 634 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 ZNF765Q7L2R6 523 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 TECPR1Q7Z6L1 1165 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 CLEC14AQ86T13 490 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 KCNE4Q8WWG9 221 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 PRR11Q96HE9 360 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 FCRL3Q96P31 734 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 DNAJC7Q99615 494 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 LGR4Q9BXB1 951 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 GSDMCQ9BYG8 508 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 FRMD8Q9BZ67 464 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-212ENST00000527887 LRRN3Q9H3W5 708 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 DPEP2Q9H4A9 486 aa14.18□□□□□ -0.14
CAPN1-212ENST00000527887 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 NPIPB15A6NHN6 443 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CDRT15L2A8MXV6 281 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 MFSD11O43934 449 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 NOBOXO60393 691 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CEACAM5P06731 702 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 IVLP07476 585 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 ITGA2BP08514 1039 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CCNB1P14635 433 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 ETV3P41162 512 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 ARHGAP25P42331 645 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 EPHB1P54762 984 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 INHBCP55103 352 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CCL7P80098 99 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CDK3Q00526 305 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 COL9A2Q14055 689 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 HLTFQ14527 1009 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 Q6ZVL8 140 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 HSD11B1LQ7Z5J1 315 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 HEATR4Q86WZ0 1026 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CCNJLQ8IV13 435 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 NRSN1Q8IZ57 195 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 SCARF2Q96GP6 870 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CRELD1Q96HD1 420 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 ZNF830Q96NB3 372 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 CARS2Q9HA77 564 aaKnown RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 MRPL40Q9NQ50 206 aaKnown RBP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPN1-212ENST00000527887 LRIT1Q9P2V4 623 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 MOSPD1Q9UJG1 213 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 SLC17A4Q9Y2C5 497 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 PCDHGA7Q9Y5G6 932 aa14.17□□□□□ -0.14
CAPN1-212ENST00000527887 MYLKQ15746 1914 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 A0A1W2PNU3 283 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RGSL1A5PLK6 1076 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 D6RAR5 112 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 PLD2O14939 933 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 ATXN7O15265 892 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 NRDCO43847 1150 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 AKR1B10O60218 316 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 TRBC1P01850 177 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RPLP0P05388 317 aaKnown RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 PDHA1P08559 390 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 GPR1P46091 355 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 PDX1P52945 283 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 ATP13A4Q4VNC1 1196 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 DENND2CQ68D51 928 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 KCTD16Q68DU8 428 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RAET1GQ6H3X3 334 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 ADAMTSL4Q6UY14 1074 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RAB11FIP2Q7L804 512 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 C17orf82Q86X59 251 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RHOT2Q8IXI1 618 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 PELI3Q8N2H9 469 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 FBXO39Q8N4B4 442 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 SPC24Q8NBT2 197 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 SNRNP27Q8WVK2 155 aaKnown RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 WBP1Q96G27 269 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 BBC3Q96PG8 261 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RNF157Q96PX1 679 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 LYSMD1Q96S90 227 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 SYNDIG1Q9H7V2 258 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 RABGEF1Q9UJ41 708 aa14.16□□□□□ -0.14
CAPN1-212ENST00000527887 FASNP49327 2511 aaKnown RBP14.15□□□□□ -0.14
CAPN1-212ENST00000527887 A0A1W2PQM1 296 aa14.15□□□□□ -0.14
CAPN1-212ENST00000527887 KLK10O43240 276 aa14.15□□□□□ -0.14
CAPN1-212ENST00000527887 TNFSF15O95150 251 aa14.15□□□□□ -0.14
CAPN1-212ENST00000527887 ZFXP17010 805 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-212ENST00000527887 KDELR1P24390 212 aa14.15□□□□□ -0.14
CAPN1-212ENST00000527887 GPR3P46089 330 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms