RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SGIP1Q9BQI5 828 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SLC22A4Q9H015 551 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DMGDHQ9UI17 866 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 AGAP1Q9UPQ3 857 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SAMD4AQ9UPU9 718 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 OR6C6A6NF89 314 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 MCIDASD6RGH6 385 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 AP5Z1O43299 807 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DUSP11O75319 330 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SLC25A12O75746 678 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 IFNA4P05014 189 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CD151P48509 253 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 MOGSQ13724 837 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SEMA3AQ14563 771 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 HERC3Q15034 1050 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ATAT1Q5SQI0 421 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 MOB2Q70IA6 237 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CYP2U1Q7Z449 544 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 THRSPQ92748 146 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 RHBDF1Q96CC6 855 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PHF21BQ96EK2 531 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZSWIM1Q9BR11 485 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FNDC11Q9BVV2 318 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 LMAN2LQ9H0V9 348 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PTPRHQ9HD43 1115 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SPAG4Q9NPE6 437 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 TRIM36Q9NQ86 728 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ARHGEF4Q9NR80 690 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DPP3Q9NY33 737 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PSME2Q9UL46 239 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 MTF2Q9Y483 593 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FAM86C2PA6NEL3 165 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DISC1C4P0D8 188 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CYP17A1P05093 508 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PRR29P0C7W0 189 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 YAP1P46937 504 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 GNG2P59768 71 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 C1QBPQ07021 282 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ABCA11PQ4W5N1 156 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 LIN52Q52LA3 116 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DCAF6Q58WW2 860 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 GRTP1Q5TC63 336 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF574Q6ZN55 896 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FAM92BQ6ZTR7 304 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 THAP5Q7Z6K1 395 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ATP6V0D2Q8N8Y2 350 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FAM98AQ8NCA5 519 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZFP28Q8NHY6 868 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 HEXDCQ8WVB3 486 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 KAT5Q92993 513 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 TSNAXQ99598 290 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ARHGAP39Q9C0H5 1083 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 UNC93B1Q9H1C4 597 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 NAALADL1Q9UQQ1 740 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DGKBQ9Y6T7 804 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 NRXN3Q9Y4C0 1643 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 LRP5O75197 1615 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 A0A1W2PQJ5 194 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZC3H11AO75152 810 aaKnown RBP eCLIP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PRAMEF1O95521 474 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SYN1P17600 705 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 RAB4AP20338 218 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DYNLL1P63167 89 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ECT2LQ008S8 904 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SMTNL2Q2TAL5 461 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 RNASEH2BQ5TBB1 312 aaKnown RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 C11orf63Q6NUN7 778 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PPP1R18Q6NYC8 613 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF549Q6P9A3 640 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SLC16A9Q7RTY1 509 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CDYL2Q8N8U2 506 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FAM47BQ8NA70 645 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 DPF1Q92782 380 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 KAT2BQ92831 832 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CAVIN3Q969G5 261 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ATG4CQ96DT6 458 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 GIMAP5Q96F15 307 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SCGB3A2Q96PL1 93 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PHF20Q9BVI0 1012 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 TRPV4Q9HBA0 871 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 NUDT15Q9NV35 164 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 STAP2Q9UGK3 403 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 MAB21L2Q9Y586 359 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PIK3C2AO00443 1686 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 A0A0G2JLL6 359 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 NPHP3-ACAD11A0A0J9YXS1 232 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 E7ENX8 843 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 GIMD1P0DJR0 217 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PBLDP30039 288 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 FMO5P49326 533 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ACADVLP49748 655 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 SPIBQ01892 262 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF177Q13360 481 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-216ENST00000527467 LDLRAP1Q5SW96 308 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 TTI2Q6NXR4 508 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 CYP20A1Q6UW02 462 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 BEND5Q7L4P6 421 aa7.24□□□□□ -1.25
CTNND1-216ENST00000527467 PRRT2Q7Z6L0 340 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms