RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CCDC187A0A096LP49 1063 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 A0A0J9YYE9 177 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 PRSS38A1L453 326 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 MTA2O94776 668 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 TRBC1P01850 177 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 CEACAM5P06731 702 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 PDHA1P08559 390 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 KDELR1P24390 212 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 ETV3P41162 512 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 CDK3Q00526 305 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 LRRC38Q5VT99 294 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 CRTC1Q6UUV9 634 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 Q6ZVL8 140 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 ZNF765Q7L2R6 523 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 NRSN1Q8IZ57 195 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 PELI3Q8N2H9 469 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 ARL14Q8N4G2 192 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 SLC35G2Q8TBE7 412 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 KIAA1524Q8TCG1 905 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 CCDC74AQ96AQ1 378 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 ZNF830Q96NB3 372 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 RNF157Q96PX1 679 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 GFM1Q96RP9 751 aaKnown RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 LGMNQ99538 433 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 GSDMCQ9BYG8 508 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 FRMD8Q9BZ67 464 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
CAPN1-207ENST00000527189 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 SPTA1P02549 2419 aa13.38□□□□□ -0.27
CAPN1-207ENST00000527189 LRP4O75096 1905 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ZW10O43264 779 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 NUDT21O43809 227 aaKnown RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 NOBOXO60393 691 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 GJC1P36383 396 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 SLC1A1P43005 524 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 EPHB1P54762 984 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 UCNP55089 124 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 PTSQ03393 145 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TLE3Q04726 772 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ILF3Q12906 894 aaKnown RBP eCLIP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 SLC10A2Q12908 348 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 HLTFQ14527 1009 aaKnown RBP eCLIP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 MESDQ14696 234 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 C14orf28Q4W4Y0 310 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 CERCAMQ5T4B2 595 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 DENND2CQ68D51 928 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 KCTD16Q68DU8 428 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 RAET1GQ6H3X3 334 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ADAMTSL4Q6UY14 1074 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 NYAP1Q6ZVC0 841 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TSPAN33Q86UF1 283 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 SPACA3Q8IXA5 215 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 CCDC13Q8IYE1 715 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 LSM14AQ8ND56 463 aaKnown RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ARRDC2Q8TBH0 407 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 RAPGEF5Q92565 580 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 SCARF2Q96GP6 870 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 PRR11Q96HE9 360 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TMEM74Q96NL1 305 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 UBL7Q96S82 380 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 LYSMD1Q96S90 227 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 CHP1Q99653 195 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TDRD1Q9BXT4 1180 aaKnown RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
CAPN1-207ENST00000527189 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 MOSPD1Q9UJG1 213 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 SLC17A4Q9Y2C5 497 aa13.37□□□□□ -0.27
CAPN1-207ENST00000527189 A0A1W2PQM1 296 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 CDRT15L2A8MXV6 281 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 D6RAR5 112 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 MFAP3LO75121 409 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 PRLP01236 227 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 PRB1P04280 392 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 IVLP07476 585 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-207ENST00000527189 CTPS1P17812 591 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 CCKBRP32239 447 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 DEKP35659 375 aaKnown RBP13.36□□□□□ -0.27
CAPN1-207ENST00000527189 GPR1P46091 355 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 PDX1P52945 283 aa13.36□□□□□ -0.27
CAPN1-207ENST00000527189 CCL7P80098 99 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms