RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RYBPQ8N488 228 aaPredicted RBP17.56■□□□□ 0.4
USH1C-205ENST00000527020 PTGR2Q8N8N7 351 aaPredicted RBP17.56■□□□□ 0.4
USH1C-205ENST00000527020 PSKH2Q96QS6 385 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 ATOH8Q96SQ7 321 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 FBRSL1Q9HCM7 1045 aaKnown RBP17.56■□□□□ 0.4
USH1C-205ENST00000527020 CCDC167Q9P0B6 97 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 PRSS51A0A1B0GVH4 220 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 ATP6AP2A0A1C7CYW4 349 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 TRIM38O00635 465 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 ATP6AP2O75787 350 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 CDK14O94921 469 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 PRLP01236 227 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 HOXB8P17481 243 aaPredicted RBP17.56■□□□□ 0.4
USH1C-205ENST00000527020 SGSHP51688 502 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 IL31Q6EBC2 164 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 TICAM1Q8IUC6 712 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 OR9I1Q8NGQ6 314 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 SMIM14Q96QK8 99 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 NLE1Q9NVX2 485 aaPredicted RBP17.56■□□□□ 0.4
USH1C-205ENST00000527020 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 DTNAQ9Y4J8 743 aa17.56■□□□□ 0.4
USH1C-205ENST00000527020 ARVCFO00192 962 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 SMIM24O75264 130 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 ALDOCP09972 364 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 CR2P20023 1033 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 TCN1P20061 433 aaPredicted RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 ATP5C1P36542 298 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 CCNHP51946 323 aaPredicted RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 STX5Q13190 355 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 PDAP1Q13442 181 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 MED21Q13503 144 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 PAOXQ6QHF9 649 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 MDGA1Q8NFP4 955 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 C2orf15Q8WU43 125 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 C19orf60Q96EN9 201 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 DCUN1D1Q96GG9 259 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 EXOC2Q96KP1 924 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 BTBD9Q96Q07 612 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 MRGBPQ9NV56 204 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 SEPT3Q9UH03 358 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 IKZF3Q9UKT9 509 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 H7C4K7 107 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 TRIM24O15164 1050 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 KDELR3O43731 214 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 KLKB1P03952 638 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 CDH4P55283 916 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 ILF2Q12905 390 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 MTA1Q13330 715 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 MAPRE2Q15555 327 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 ANKS3Q6ZW76 656 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 RHEBL1Q8TAI7 183 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 LPGAT1Q92604 370 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 NSUN5Q96P11 429 aaKnown RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 ZBED2Q9BTP6 218 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 TTPALQ9BTX7 342 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 SPON2Q9BUD6 331 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 COPS7BQ9H9Q2 264 aaPredicted RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 UBA2Q9UBT2 640 aaPredicted RBP17.55■□□□□ 0.4
USH1C-205ENST00000527020 DNAJC15Q9Y5T4 150 aa17.55■□□□□ 0.4
USH1C-205ENST00000527020 ANAPC1Q9H1A4 1944 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 GPC4O75487 556 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 CAPNS1P04632 268 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 SNRPB2P08579 225 aaKnown RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 FOXA1P55317 472 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 C8orf82Q6P1X6 216 aaPredicted RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 TMEM126BQ8IUX1 230 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 DENND1CQ8IV53 801 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 FUNDC1Q8IVP5 155 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 CLYBLQ8N0X4 340 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 FBXO22Q8NEZ5 403 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 OR4K2Q8NGD2 314 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 DLG3Q92796 817 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 GCNAQ96QF7 691 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 PKP2Q99959 881 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 CINPQ9BW66 212 aaPredicted RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 TANC1Q9C0D5 1861 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 TFB2MQ9H5Q4 396 aaKnown RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 INTS10Q9NVR2 710 aaKnown RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 ADA2Q9NZK5 511 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 SUCOQ9UBS9 1254 aaKnown RBP17.54■□□□□ 0.4
USH1C-205ENST00000527020 BCAP29Q9UHQ4 241 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 PTGDR2Q9Y5Y4 395 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 ANKRD12Q6UB98 2062 aa17.54■□□□□ 0.4
USH1C-205ENST00000527020 FGF4P08620 206 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
USH1C-205ENST00000527020 PSMA3P25788 255 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 PMLP29590 882 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 SCNN1BP51168 640 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 FOLH1Q04609 750 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 ELAVL2Q12926 359 aaKnown RBP17.53■□□□□ 0.4
USH1C-205ENST00000527020 GRM2Q14416 872 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 PFKFB4Q16877 469 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 MMEL1Q495T6 779 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 PAQR3Q6TCH7 311 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 ICA1LQ8NDH6 482 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
USH1C-205ENST00000527020 ASB9Q96DX5 294 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms