RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 KIAA1456Q9P272 454 aa3.85□□□□□ -1.79
CSDE1-210ENST00000525878 TMEM202A6NGA9 273 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 PLIN1O60240 522 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 SHMT1P34896 483 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 METAP2P50579 478 aaKnown RBP eCLIP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 EEF1A1P68104 462 aaKnown RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 GTF2H2Q13888 395 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 PRKG1Q13976 671 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 KRT72Q14CN4 511 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 ANKRD1Q15327 319 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 C2orf68Q2NKX9 166 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 GPATCH4Q5T3I0 446 aaKnown RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 EEF1A1P5Q5VTE0 462 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 GTF2H2CQ6P1K8 395 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 KCTD18Q6PI47 426 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 CCDC174Q6PII3 467 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 GPAT4Q86UL3 456 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 TMTC1Q8IUR5 882 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 APLFQ8IW19 511 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF248Q8NDW4 579 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 ST6GAL2Q96JF0 529 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 EGFL8Q99944 293 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 PAGR1Q9BTK6 254 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 NUF2Q9BZD4 464 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 ALKBH4Q9NXW9 302 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 ZNF624Q9P2J8 865 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 PEMTQ9UBM1 199 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 FBXO9Q9UK97 447 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 FAF1Q9UNN5 650 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-210ENST00000525878 KCNK7Q9Y2U2 307 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 PRSS21Q9Y6M0 314 aa3.84□□□□□ -1.79
CSDE1-210ENST00000525878 TAF4O00268 1085 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 BCAT2O15382 392 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-210ENST00000525878 KLK10O43240 276 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 CRLF1O75462 422 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 TERF1P54274 439 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 ISL1P61371 349 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 PDE1BQ01064 536 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 TRIM14Q14142 442 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 TAF11Q15544 211 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 TCTN1Q2MV58 587 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 ADCK5Q3MIX3 580 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 SIRPB2Q5JXA9 342 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 SRBD1Q8N5C6 995 aaKnown RBP3.83□□□□□ -1.8
CSDE1-210ENST00000525878 EYA3Q99504 573 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 FAM167BQ9BTA0 163 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 FSD1Q9BTV5 496 aa3.83□□□□□ -1.8
CSDE1-210ENST00000525878 POLR3CQ9BUI4 534 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-210ENST00000525878 PHF7Q9BWX1 381 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-210ENST00000525878 PRKNO60260 465 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 MT-CYBP00156 380 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 IGHV4-39P01824 125 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 BDKRB2P30411 391 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 LUMP51884 338 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 EFNA5P52803 228 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 LMO4P61968 165 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 EFR3AQ14156 821 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 ZNF234Q14588 700 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 METTL2BQ6P1Q9 378 aaKnown RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 FBXO46Q6PJ61 603 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 TADA2BQ86TJ2 420 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 DHX40Q8IX18 779 aaKnown RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 SPICE1Q8N0Z3 855 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 PLD5Q8N7P1 536 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 PIGTQ969N2 578 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 METTL2AQ96IZ6 378 aaKnown RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 PCYT2Q99447 389 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 CMKLR1Q99788 373 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 BEX4Q9NWD9 120 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 IL1RAPL1Q9NZN1 696 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 CTNNAL1Q9UBT7 734 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 DAAM1Q9Y4D1 1078 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 RIPOR2Q9Y4F9 1068 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 LSM4Q9Y4Z0 139 aaKnown RBP3.82□□□□□ -1.8
CSDE1-210ENST00000525878 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
CSDE1-210ENST00000525878 SMIM1B2RUZ4 78 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 NR5A2O00482 541 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 DRG2P55039 364 aaKnown RBP3.81□□□□□ -1.8
CSDE1-210ENST00000525878 RPL24P83731 157 aaKnown RBP3.81□□□□□ -1.8
CSDE1-210ENST00000525878 SLC45A4Q5BKX6 768 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 SFMBT2Q5VUG0 894 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 ATF7IPQ6VMQ6 1270 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 ADGRG6Q86SQ4 1221 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 ZCCHC9Q8N567 271 aaKnown RBP3.81□□□□□ -1.8
CSDE1-210ENST00000525878 ZBTB2Q8N680 514 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 MTERF1Q99551 399 aaKnown RBP3.81□□□□□ -1.8
CSDE1-210ENST00000525878 PLEKHA4Q9H4M7 779 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 PPP1R3EQ9H7J1 279 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 LOXL2Q9Y4K0 774 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 RNF215Q9Y6U7 377 aa3.81□□□□□ -1.8
CSDE1-210ENST00000525878 IGLV5-45A0A087WSX0 123 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 GOLGA6L10A0A0M3HER8 536 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 TEX22C9J3V5 150 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 TSPAN3O60637 253 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 ERVK-10P10266 1014 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 CHKAP35790 457 aa3.8□□□□□ -1.8
CSDE1-210ENST00000525878 VEPH1Q14D04 833 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms