RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 GALNT2Q10471 571 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 MMRN1Q13201 1228 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 CLN3Q13286 438 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 ARHGEF7Q14155 803 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 PTPRRQ15256 657 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
SPIDR-221ENST00000523814 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 DENND2CQ68D51 928 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 USP45Q70EL2 814 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 SPRED1Q7Z699 444 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 NRROSQ86YC3 692 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 FATE1Q969F0 183 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 CARS2Q9HA77 564 aaKnown RBP16.78■□□□□ 0.28
SPIDR-221ENST00000523814 NT5MQ9NPB1 228 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 NENFQ9UMX5 172 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 KIF26BQ2KJY2 2108 aa16.78■□□□□ 0.28
SPIDR-221ENST00000523814 B4DGG1 531 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 FGF1P05230 155 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 PDHA1P08559 390 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 KRT10P13645 584 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 SLC5A2P31639 672 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 GARSP41250 739 aaKnown RBP16.77■□□□□ 0.28
SPIDR-221ENST00000523814 CDK3Q00526 305 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 B4GALNT1Q00973 533 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 DPYSL3Q14195 570 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 PAFAH1B3Q15102 231 aaKnown RBP16.77■□□□□ 0.28
SPIDR-221ENST00000523814 ATP13A4Q4VNC1 1196 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 ALG1LQ6GMV1 187 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 NLRP8Q86W28 1048 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 NDUFAF2Q8N183 169 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 ZNF843Q8N446 348 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 KIAA1524Q8TCG1 905 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 MAML1Q92585 1016 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 TMEM159Q96B96 161 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 SCARF2Q96GP6 870 aaPredicted RBP16.77■□□□□ 0.28
SPIDR-221ENST00000523814 TSGA13Q96PP4 275 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 SEMA3CQ99985 751 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 GSDMCQ9BYG8 508 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 ACSL6Q9UKU0 697 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 SLC17A4Q9Y2C5 497 aa16.77■□□□□ 0.28
SPIDR-221ENST00000523814 K7ENP7 123 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 MATN3O15232 486 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 NVLO15381 856 aaKnown RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 B4GAT1O43505 415 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 GYPCP04921 128 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 CTPS1P17812 591 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 CCNCP24863 283 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 SSR1P43307 286 aaKnown RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 PTSQ03393 145 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 IHHQ14623 411 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ANKRD20A8PQ5CZ79 823 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 INO80CQ6PI98 192 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ZNF438Q7Z4V0 828 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 KCTD6Q8NC69 237 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 POLR1EQ9GZS1 481 aaKnown RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 TAAR2Q9P1P5 351 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 AMACRQ9UHK6 382 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ATXN7L1Q9ULK2 861 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-221ENST00000523814 SUFUQ9UMX1 484 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ST14Q9Y5Y6 855 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 CFAP46Q8IYW2 2715 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 ATMQ13315 3056 aa16.76■□□□□ 0.27
SPIDR-221ENST00000523814 CAPN8A6NHC0 703 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 MFSD11O43934 449 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 PROSCO94903 275 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 SOD1P00441 154 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 IVLP07476 585 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 HGFP14210 728 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 GNPDA1P46926 289 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 POLD2P49005 469 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 CFHR1Q03591 330 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ITKQ08881 620 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 NR1D2Q14995 579 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 PDK2Q15119 407 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 IFI16Q16666 785 aaKnown RBP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 TAF1BQ53T94 588 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 LRRC66Q68CR7 880 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 NCBP2-AS2Q69YL0 99 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 RAET1GQ6H3X3 334 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ADAMTSL4Q6UY14 1074 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 RFLNAQ6ZTI6 216 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ZNF765Q7L2R6 523 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 SLITRK4Q8IW52 837 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ZNF564Q8TBZ8 553 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 PTCD2Q8WV60 388 aaKnown RBP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 TTC9Q92623 222 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ZNF670Q9BS34 389 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 RBM22Q9NW64 420 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPIDR-221ENST00000523814 IFNKQ9P0W0 207 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 UVRAGQ9P2Y5 699 aa16.75■□□□□ 0.27
SPIDR-221ENST00000523814 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
SPIDR-221ENST00000523814 A0A0U1RQS6 177 aa16.74■□□□□ 0.27
SPIDR-221ENST00000523814 GOLGA6L19H0YKK7 550 aa16.74■□□□□ 0.27
SPIDR-221ENST00000523814 EFSO43281 561 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms