RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	CHPF	Q8IZ52	775 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	CRYBG2	Q8N1P7	616 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	ARHGAP18	Q8N392	663 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	CAMKK1	Q8N5S9	505 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	DDI1	Q8WTU0	396 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	RLN3	Q8WXF3	142 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	OVCA2	Q8WZ82	227 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	RGMA	Q96B86	450 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	NT5C1B	Q96P26	610 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	TWNK	Q96RR1	684 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	HNRNPAB	Q99729	332 aa	Known RBP	6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	TTLL2	Q9BWV7	592 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	DUSP16	Q9BY84	665 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	PDCL3	Q9H2J4	239 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	APOBEC3G	Q9HC16	384 aa	Known RBP	6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	SPHK2	Q9NRA0	654 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	SEMA4G	Q9NTN9	838 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	PLK2	Q9NYY3	685 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	JKAMP	Q9P055	326 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	WDR35	Q9P2L0	1181 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	SLC23A1	Q9UHI7	598 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	NME7	Q9Y5B8	376 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	PCDHA13	Q9Y5I0	950 aa		6.37	□□□□□ -1.39
EIF3E-216	ENST00000522887	COL4A3	Q01955	1670 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SLC16A3	O15427	465 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SYNCRIP	O60506	623 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	OAS1	P00973	400 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	TYR	P14679	529 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	ANP32A	P39687	249 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	PPP1R2	P41236	205 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	HARS2	P49590	506 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	RGS7	P49802	495 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	ATXN3	P54252	364 aa	Predicted RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	YWHAG	P61981	247 aa	Known RBP eCLIP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	COG7	P83436	770 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	NHLH2	Q02577	135 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	LRRC63	Q05C16	580 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	IL10RA	Q13651	578 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	BYSL	Q13895	437 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SF3A2	Q15428	464 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	CRIP3	Q6Q6R5	217 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	TMEM270	Q6UE05	265 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	CLEC20A	Q6ZU45	233 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	PAQR9	Q6ZVX9	377 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	RRAGA	Q7L523	313 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	LPCAT2	Q7L5N7	544 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SYT13	Q7L8C5	426 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	TRMT11	Q7Z4G4	463 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	PDSS2	Q86YH6	399 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	DENND1C	Q8IV53	801 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	FITM2	Q8N6M3	262 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	UCMA	Q8WVF2	138 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	PIGK	Q92643	395 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SEMA4D	Q92854	862 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	OTUB2	Q96DC9	234 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	MTFMT	Q96DP5	389 aa	Known RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	DHTKD1	Q96HY7	919 aa	Predicted RBP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	PLEKHG4B	Q96PX9	1271 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	MED15	Q96RN5	788 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	CIPC	Q9C0C6	399 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	MIS12	Q9H081	205 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	VPS11	Q9H270	941 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	LDAH	Q9H6V9	325 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	TMEM30A	Q9NV96	361 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	MAN1B1	Q9UKM7	699 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	SCML2	Q9UQR0	700 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	VWA8	A3KMH1	1905 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	NCOR1	O75376	2440 aa		6.36	□□□□□ -1.39
EIF3E-216	ENST00000522887	MYH11	P35749	1972 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	SYNJ2BP-COX16	A0A087WUM0	186 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	FAM237A	A0A1B0GTK4	181 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887		H3BML4	177 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887		K7EQS6	105 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887		M0QYV0	167 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CAPN9	O14815	690 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	TULP3	O75386	442 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	SLC43A1	O75387	559 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CAVIN2	O95810	425 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	ZBED1	O96006	694 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CFI	P05156	583 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	ACADM	P11310	421 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	VDR	P11473	427 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	HOXB2	P14652	356 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	TBXAS1	P24557	533 aa	Predicted RBP	6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CORO1A	P31146	461 aa	Known RBP	6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CHKA	P35790	457 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	OPRD1	P41143	372 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	TNFRSF4	P43489	277 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	MTIF2	P46199	727 aa	Known RBP	6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	FMO5	P49326	533 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	ATXN1	P54253	815 aa	Known RBP	6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	RAD23B	P54727	409 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	BLOC1S1	P78537	153 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	MRPS21	P82921	87 aa	Known RBP	6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	ZXDB	P98169	803 aa		6.35	□□□□□ -1.39
EIF3E-216	ENST00000522887	CUL2	Q13617	745 aa		6.35	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms