RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MREGQ8N565 214 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ART4Q93070 314 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PPCDCQ96CD2 204 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 MYRFQ9Y2G1 1151 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 C3P01024 1663 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 CENPXA8MT69 81 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 BMP7P18075 431 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 GSSP48637 474 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 BLKP51451 505 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 UBXN2BQ14CS0 331 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 FNBP1LQ5T0N5 605 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 EIF3MQ7L2H7 374 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 PANX1Q96RD7 426 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 ZNF607Q96SK3 696 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 KLHL1Q9NR64 748 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SNX15Q9NRS6 342 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 SEMA3GQ9NS98 782 aa16.25■□□□□ 0.19
PCDHA3-201ENST00000522353 CBX6O95503 412 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 BCL10O95999 233 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 BMP6P22004 513 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 PACS1Q6VY07 963 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 LPCAT2Q7L5N7 544 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 ECHDC2Q86YB7 292 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 CENPIQ92674 756 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 COQ6Q9Y2Z9 468 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 ALOX15BO15296 676 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 BIRC5O15392 142 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 GPD2P43304 727 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 CNKSR3Q6P9H4 555 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 OR8H2Q8N162 312 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 FAM84AQ96KN4 292 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 OLFM1Q99784 485 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 ZFP37Q9Y6Q3 630 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 TPSB2P20231 275 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 NDST2P52849 883 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 CDC42P60953 191 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 USP4Q13107 963 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 AUHQ13825 339 aaKnown RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 TPSAB1Q15661 275 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 FBXO30Q8TB52 745 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 KLRG2A4D1S0 409 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 SRRM3A6NNA2 597 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 RHPN2P1A8MT19 583 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 OR6B1O95007 311 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 GNSP15586 552 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 RPL4P36578 427 aaKnown RBP16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 HDDC2Q7Z4H3 204 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 ARMC8Q8IUR7 673 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 RACGAP1Q9H0H5 632 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC25A51Q9H1U9 297 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 FZD8Q9H461 694 aa16.24■□□□□ 0.19
PCDHA3-201ENST00000522353 MED26O95402 600 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 TSPAN19P0C672 248 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 PTSQ03393 145 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 RFTN2Q52LD8 501 aaPredicted RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 LRRC74BQ6ZQY2 392 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 AARSD1Q9BTE6 412 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 CNPPD1Q9BV87 410 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 LINC00854A0A1B0GVQ3 168 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 RPL17P18621 184 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 TPP2P29144 1249 aaPredicted RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 AKT2P31751 481 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 GCNT7Q6ZNI0 430 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 BNIPLQ7Z465 357 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 PCDH20Q8N6Y1 951 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 MYBPHLA2RUH7 354 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 WBP4O75554 376 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 FSBPO95073 299 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 ITCHQ96J02 903 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 COL6A1P12109 1028 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 IDO1P14902 403 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 VITQ6UXI7 678 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 FAM220AQ7Z4H9 259 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 TAC4Q86UU9 113 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SMYD1Q8NB12 490 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 LRRN4CLQ8ND94 238 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 ZSCAN18Q8TBC5 510 aaPredicted RBP16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC38A2Q96QD8 506 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
PCDHA3-201ENST00000522353 SCN2BO60939 215 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 LRIG2O94898 1065 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 CDH3P22223 829 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 DAOAP59103 153 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 CCL14Q16627 93 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 ARMC4Q5T2S8 1044 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 CERCAMQ5T4B2 595 aa16.22■□□□□ 0.19
PCDHA3-201ENST00000522353 KRT77Q7Z794 578 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms