RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 VIPR1P32241 457 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 LIG3P49916 1009 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 ARL4CP56559 192 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 SARNPP82979 210 aaKnown RBP15.32■□□□□ 0.04
LSM1-203ENST00000520755 BBS9Q3SYG4 887 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 FAM153CQ494X1 144 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 TMEM259Q4ZIN3 620 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 SETMARQ53H47 684 aaPredicted RBP15.32■□□□□ 0.04
LSM1-203ENST00000520755 UBAP2Q5T6F2 1119 aaKnown RBP15.32■□□□□ 0.04
LSM1-203ENST00000520755 DENND2CQ68D51 928 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 MICALCLQ6ZW33 695 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 LYSMD3Q7Z3D4 306 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 IGDCC3Q8IVU1 814 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 EIF1ADQ8N9N8 165 aaKnown RBP15.32■□□□□ 0.04
LSM1-203ENST00000520755 BLOC1S5Q8TDH9 187 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 FMO2Q99518 471 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 MYOCQ99972 504 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 FRMD8Q9BZ67 464 aaPredicted RBP15.32■□□□□ 0.04
LSM1-203ENST00000520755 PHACTR1Q9C0D0 580 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 EBF2Q9HAK2 575 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 PLAC1Q9HBJ0 212 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 NCDNQ9UBB6 729 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 COQ6Q9Y2Z9 468 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 ADAMTS9Q9P2N4 1935 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 A0A1W2PPC4 97 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 C10orf142B7Z368 130 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 LATO43561 262 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 LDB2O43679 373 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
LSM1-203ENST00000520755 TM7SF2O76062 418 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 C1SP09871 688 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 C6P13671 934 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 GM2AP17900 193 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 MPLP40238 635 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 SGCGQ13326 291 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 ARHGEF7Q14155 803 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 CCDC6Q16204 474 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 CNGA3Q16281 694 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 CCDC38Q502W7 563 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 HP1BP3Q5SSJ5 553 aaPredicted RBP15.31■□□□□ 0.04
LSM1-203ENST00000520755 LRRC66Q68CR7 880 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 CRTC1Q6UUV9 634 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 CCNI2Q6ZMN8 369 aaPredicted RBP15.31■□□□□ 0.04
LSM1-203ENST00000520755 SYT12Q8IV01 421 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 DNASE2BQ8WZ79 361 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 RANBP9Q96S59 729 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 MAGEE1Q9HCI5 957 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 FZD3Q9NPG1 666 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 TMEM74BQ9NUR3 256 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 PILRBQ9UKJ0 227 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 TCAF1Q9Y4C2 921 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 KCTD3Q9Y597 815 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 ARL5AQ9Y689 179 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 TEX264Q9Y6I9 313 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 SLCO1B1Q9Y6L6 691 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 GON4LQ3T8J9 2241 aa15.31■□□□□ 0.04
LSM1-203ENST00000520755 C1orf232A0A0U1RR37 186 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 MROH6A6NGR9 719 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 CLDN7O95471 211 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 PAK4O96013 591 aaPredicted RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 SLC4A1P02730 911 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 RETP07949 1114 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 GNSP15586 552 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 ELK3P41970 407 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 PI4KAP42356 2102 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 NPY2RP49146 381 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 PDIA2Q13087 525 aaKnown RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 FGL2Q14314 439 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 PTPRCAPQ14761 206 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 ACOX1Q15067 660 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 LIPIQ6XZB0 460 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 AENQ8WTP8 325 aaKnown RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 SERAC1Q96JX3 654 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 SLC6A18Q96N87 628 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 ORAI3Q9BRQ5 295 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 C1QTNF2Q9BXJ5 285 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 TXLNGYQ9BZA5 131 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 FOXP3Q9BZS1 431 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 IL22Q9GZX6 179 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 AASDHPPTQ9NRN7 309 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.3■□□□□ 0.045e-6■□□□□ 10.9
LSM1-203ENST00000520755 BFARQ9NZS9 450 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 HACD3Q9P035 362 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 MTRF1LQ9UGC7 380 aaKnown RBP15.3■□□□□ 0.04
LSM1-203ENST00000520755 SOX13Q9UN79 622 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 CHMP2BQ9UQN3 213 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 PCDHGA5Q9Y5G8 931 aa15.3■□□□□ 0.04
LSM1-203ENST00000520755 LRP4O75096 1905 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 CCDC78A2IDD5 438 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 AP3B1O00203 1094 aa15.29■□□□□ 0.04
LSM1-203ENST00000520755 EIF3HO15372 352 aaKnown RBP eCLIP15.29■□□□□ 0.04
LSM1-203ENST00000520755 BCAT2O15382 392 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms