RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 TOP3BO95985 862 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 CTSLP07711 333 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 CD9P21926 228 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 LHCGRP22888 699 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 MC4RP32245 332 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 SLC26A3P40879 764 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 ADARP55265 1226 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 ST8SIA6P61647 398 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 POLR2LP62875 67 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 KDSRQ06136 332 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 ENPP2Q13822 863 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 ITPRIPL2Q3MIP1 535 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 PREPLQ4J6C6 727 aaPredicted RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 FASTKD1Q53R41 847 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 RBM20Q5T481 1227 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 FAM45BPQ6NSW5 357 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 CRTC1Q6UUV9 634 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 SDCCAG8Q86SQ7 713 aaPredicted RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 SLC41A1Q8IVJ1 513 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 FAM45AQ8TCE6 357 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 DTX3LQ8TDB6 740 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 ZNF473Q8WTR7 871 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 RPP25Q9BUL9 199 aaKnown RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 SLC13A1Q9BZW2 595 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 BRD9Q9H8M2 597 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 POPDC3Q9HBV1 291 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 THAP10Q9P2Z0 257 aaPredicted RBP16.02■□□□□ 0.16
SNHG6-201ENST00000520348 IL36AQ9UHA7 158 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 HCN2Q9UL51 889 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 VPS9D1Q9Y2B5 631 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 PKP3Q9Y446 797 aa16.02■□□□□ 0.16
SNHG6-201ENST00000520348 A0A087X1B8 175 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 C1orf232A0A0U1RR37 186 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 TCP11X1B4DZS4 312 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 LEFTY1O75610 366 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 STMN1P16949 149 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 FDXRP22570 491 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 GDI1P31150 447 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 GRIA2P42262 883 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 CACNG1Q06432 222 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 CCDC153Q494R4 210 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 ZNF805Q5CZA5 627 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 AARS2Q5JTZ9 985 aaKnown RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 N4BP2L1Q5TBK1 243 aaPredicted RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 HECTD2Q5U5R9 776 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 NAIF1Q69YI7 327 aaPredicted RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 ZNF549Q6P9A3 640 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 PIGWQ7Z7B1 504 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 CEP97Q8IW35 865 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 SUGP1Q8IWZ8 645 aaKnown RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 PIANPQ8IYJ0 282 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 CENPLQ8N0S6 344 aaPredicted RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 PLD6Q8N2A8 252 aaKnown RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 TSPAN17Q96FV3 270 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 KLHL32Q96NJ5 620 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 GPR78Q96P69 363 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 OLFM1Q99784 485 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 AARSD1Q9BTE6 412 aaKnown RBP16.01■□□□□ 0.15
SNHG6-201ENST00000520348 TRPV5Q9NQA5 729 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 TMEM216Q9P0N5 145 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 PLA2G4CQ9UP65 541 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 NUMBLQ9Y6R0 609 aa16.01■□□□□ 0.15
SNHG6-201ENST00000520348 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 NDUFAB1O14561 156 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 PHGDHO43175 533 aaKnown RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 KAT7O95251 611 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 BPGMP07738 259 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 HNRNPLP14866 589 aaKnown RBP eCLIP16■□□□□ 0.15
SNHG6-201ENST00000520348 ZNF30P17039 623 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 BPIP17213 487 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 TTPAP49638 278 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 IRF9Q00978 393 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 TIAL1Q01085 375 aaKnown RBP eCLIP16■□□□□ 0.15
SNHG6-201ENST00000520348 ZNF234Q14588 700 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 SEPT7Q16181 437 aaKnown RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 PSAPL1Q6NUJ1 521 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 CERS6Q6ZMG9 384 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 LDB1Q86U70 411 aaPredicted RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 TSPAN33Q86UF1 283 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 SFTPA1Q8IWL2 248 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 TRIM42Q8IWZ5 723 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 RAVER1Q8IY67 606 aaKnown RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 ARMC2Q8NEN0 867 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 TMIEQ8NEW7 156 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 ST13P5Q8NFI4 369 aaPredicted RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 UCMAQ8WVF2 138 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 ZNF75CPQ92670 426 aaPredicted RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 ELMO2Q96JJ3 720 aa16■□□□□ 0.15
SNHG6-201ENST00000520348 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
SNHG6-201ENST00000520348 B4GALT6Q9UBX8 382 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms