RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 LRRC31Q6UY01 552 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SPNS3Q6ZMD2 512 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 GDF7Q7Z4P5 450 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 C17orf82Q86X59 251 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 BMPERQ8N8U9 685 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 OR56A4Q8NGH8 313 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 THAP4Q8WY91 577 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PMEPA1Q969W9 287 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TSACCQ96A04 125 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 DHX58Q96C10 678 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 HDAC11Q96DB2 347 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MRRFQ96E11 262 aaKnown RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 EEF2KMTQ96G04 330 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PSMB7Q99436 277 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 NUDT22Q9BRQ3 303 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 APOOQ9BUR5 198 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SLC25A23Q9BV35 468 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MIS12Q9H081 205 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TNKS2Q9H2K2 1166 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 THAP9Q9H5L6 903 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 RETREG1Q9H6L5 497 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ZDHHC6Q9H6R6 413 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MMRN2Q9H8L6 949 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 FAM204AQ9H8W3 233 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SLAMF7Q9NQ25 335 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MRPL40Q9NQ50 206 aaKnown RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ST7Q9NRC1 585 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 EXOC1Q9NV70 894 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ASNSD1Q9NWL6 643 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TMEM63CQ9P1W3 806 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PDP2Q9P2J9 529 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 VANGL2Q9ULK5 521 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF451Q9Y4E5 1061 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 OAS3Q9Y6K5 1087 aaKnown RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 RPS6KL1Q9Y6S9 549 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ABCA2Q9BZC7 2435 aa4.9□□□□□ -1.62
SDCBP-207ENST00000520168 IGHV1OR21-1A0A087WYE8 117 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 CFAP69A5D8W1 941 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 A6NCN8 305 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 GOLGA6L3A6NEY3 463 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 C21orf140B9A014 251 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 K7EM74 188 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 K7ERQ8 282 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 AGRPO00253 132 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 PDE2AO00408 941 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 B4GAT1O43505 415 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 SNAP91O60641 907 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 HSF2BPO75031 334 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 POP4O95707 220 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 MT-ND3P03897 115 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 CCNB1P14635 433 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 XPAP23025 273 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 CD1CP29017 333 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OR1E1P30953 314 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 DLSTP36957 453 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 NASPP49321 788 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 DNA2P51530 1060 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OR1D5P58170 312 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 PSMA6P60900 246 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 ILF3Q12906 894 aaKnown RBP eCLIP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 STK4Q13043 487 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 MRPL49Q13405 166 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 ERV3-1Q14264 604 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 INPP5AQ14642 412 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 GRM3Q14832 879 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 CHRNA6Q15825 494 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 BRMS1LQ5PSV4 323 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 SYPL2Q5VXT5 272 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 JMJD6Q6NYC1 403 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 WDR74Q6RFH5 385 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 TTC7BQ86TV6 843 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 MCEMP1Q8IX19 187 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 TP53INP2Q8IXH6 220 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 RHOT1Q8IXI2 618 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 KIAA0895Q8NCT3 520 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OR2AP1Q8NGE2 309 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OR52K2Q8NGK3 314 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OR10G6Q8NH81 332 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 HCAR2Q8TDS4 363 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 SEMA4DQ92854 862 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 TP53INP1Q96A56 240 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 PNPLA2Q96AD5 504 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 PDXPQ96GD0 296 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 TCTN2Q96GX1 697 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 AHCYL2Q96HN2 611 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 C1orf74Q96LT6 269 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 GSDMCQ9BYG8 508 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 ATP13A1Q9HD20 1204 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 MLXIPLQ9NP71 852 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 MBNL1Q9NR56 388 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 DDIT4Q9NX09 232 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 OCIAD1Q9NX40 245 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 KCTD5Q9NXV2 234 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 RRN3Q9NYV6 651 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 TMA7Q9Y2S6 64 aaKnown RBP4.9□□□□□ -1.63
SDCBP-207ENST00000520168 COQ4Q9Y3A0 265 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 HS3ST4Q9Y661 456 aa4.9□□□□□ -1.63
SDCBP-207ENST00000520168 CROCCQ5TZA2 2017 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms