RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SERPINA4P29622 427 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 DGKGP49619 791 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 CLCN5P51795 746 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 CDKN3Q16667 212 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 LMNTD2Q8IXW0 634 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 PCDH20Q8N6Y1 951 aaKnown RBP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 OR2A12Q8NGT7 310 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 GABPB2Q8TAK5 448 aaPredicted RBP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 FRS2Q8WU20 508 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 GPR78Q96P69 363 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 CIPCQ9C0C6 399 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 CEP44Q9C0F1 390 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 NSUN3Q9H649 340 aaKnown RBP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 NMRAL1Q9HBL8 299 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 GDE1Q9NZC3 331 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 COPG2Q9UBF2 871 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 VWA7Q9Y334 891 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 SBK3P0C264 359 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 CRABP2P29373 138 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 MC4RP32245 332 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 TIAL1Q01085 375 aaKnown RBP eCLIP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 NAIF1Q69YI7 327 aaPredicted RBP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 ZNF557Q8N988 423 aaPredicted RBP23.34■■□□□ 1.33
SLIT3-204ENST00000518140 FAM83CQ9BQN1 747 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 SUV39H2Q9H5I1 410 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 HACD3Q9P035 362 aa23.34■■□□□ 1.33
SLIT3-204ENST00000518140 G3V2L1 256 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 KLF11O14901 512 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 CLDN7O95471 211 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 ADH1CP00326 375 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 FGF3P11487 239 aaPredicted RBP23.33■■□□□ 1.33
SLIT3-204ENST00000518140 STC1P52823 247 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 RPL26P61254 145 aaKnown RBP23.33■■□□□ 1.33
SLIT3-204ENST00000518140 XIAPP98170 497 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 DLX2Q07687 328 aaPredicted RBP23.33■■□□□ 1.33
SLIT3-204ENST00000518140 PTPRNQ16849 979 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 TAF1BQ53T94 588 aaPredicted RBP23.33■■□□□ 1.33
SLIT3-204ENST00000518140 PSAPL1Q6NUJ1 521 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 AFTPHQ6ULP2 937 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 TMEM207Q6UWW9 146 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 PIM3Q86V86 326 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 TTC8Q8TAM2 541 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 PPP2R3CQ969Q6 453 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 GRAMD1AQ96CP6 724 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 PLA2G2FQ9BZM2 168 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 RPL26L1Q9UNX3 145 aaKnown RBP23.33■■□□□ 1.33
SLIT3-204ENST00000518140 SLC12A4Q9UP95 1085 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 ANKRD6Q9Y2G4 727 aa23.33■■□□□ 1.33
SLIT3-204ENST00000518140 POP4O95707 220 aaKnown RBP23.32■■□□□ 1.32
SLIT3-204ENST00000518140 UGT2B4P06133 528 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 CPA3P15088 417 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 PMLP29590 882 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 HMGCLP35914 325 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 SLC12A2P55011 1212 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 TYSND1Q2T9J0 566 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 CCDC153Q494R4 210 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 ATG14Q6ZNE5 492 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 SDCCAG8Q86SQ7 713 aaPredicted RBP23.32■■□□□ 1.32
SLIT3-204ENST00000518140 TSPAN33Q86UF1 283 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 SFTPA1Q8IWL2 248 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 ETFBKMTQ8IXQ9 262 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 ZNF366Q8N895 744 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 MAGEC3Q8TD91 643 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 NXPE3Q969Y0 559 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 ECHDC3Q96DC8 303 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 NPHS2Q9NP85 383 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 HPS4Q9NQG7 708 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 C1orf232A0A0U1RR37 186 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 TK2O00142 265 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 LRRC73Q5JTD7 316 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 VITQ6UXI7 678 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 GRIN3AQ8TCU5 1115 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 FAM136AQ96C01 138 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 MYADMQ96S97 322 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 CPEB1Q9BZB8 566 aaKnown RBP23.32■■□□□ 1.32
SLIT3-204ENST00000518140 TRPV4Q9HBA0 871 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 CLEC1BQ9P126 229 aa23.32■■□□□ 1.32
SLIT3-204ENST00000518140 NPIPB15A6NHN6 443 aaPredicted RBP23.31■■□□□ 1.32
SLIT3-204ENST00000518140 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.31■■□□□ 1.32
SLIT3-204ENST00000518140 OGNP20774 298 aaKnown RBP23.31■■□□□ 1.32
SLIT3-204ENST00000518140 TRPM8Q7Z2W7 1104 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 TDHQ8IZJ6 230 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 RFWD2Q8NHY2 731 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ANKRD49Q8WVL7 239 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 RMDN2Q96LZ7 410 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 TUBGCP5Q96RT8 1024 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ECT2Q9H8V3 914 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ZFYVE1Q9HBF4 777 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 IGSF5Q9NSI5 407 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 CDH7Q9ULB5 785 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 PRRT4C9JH25 899 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ITM2AO43736 263 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 MGRN1O60291 552 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 CA5AP35218 305 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ZRANB3Q5FWF4 1079 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 FSTL5Q8N475 847 aaPredicted RBP23.31■■□□□ 1.32
SLIT3-204ENST00000518140 KIAA1958Q8N8K9 716 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 HEXDCQ8WVB3 486 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 MOCOSQ96EN8 888 aa23.31■■□□□ 1.32
SLIT3-204ENST00000518140 ARL2BPQ9Y2Y0 163 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms