RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZSCAN5BA6NJL1 495 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CCDC85CA6NKD9 419 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 USP27XA6NNY8 438 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 C16orf90A8MZG2 172 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 HSPB6O14558 160 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 RGS10O43665 173 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CDC123O75794 336 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 UNC5CO95185 931 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 GRPP07492 148 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMEM225BP0DP42 221 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 MTHFD2P13995 350 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ANXA7P20073 488 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 SMARCA1P28370 1054 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 RFC1P35251 1148 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PTPN9P43378 593 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PGDP52209 483 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 KPNA1P52294 538 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 IST1P53990 364 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CACNB3P54284 484 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 EEF1A1P68104 462 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 RPL24P83731 157 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TIAL1Q01085 375 aaKnown RBP eCLIP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 DSG1Q02413 1049 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 MTF1Q14872 753 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 GPNMBQ14956 572 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 SLC10A5Q5PT55 438 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PAPPA-AS1Q5QFB9 102 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 C9orf129Q5T035 196 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 EEF1A1P5Q5VTE0 462 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TRNP1Q6NT89 227 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CCDC144NLQ6NUI1 221 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ADAMTSL5Q6ZMM2 481 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CDHR3Q6ZTQ4 885 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMTC3Q6ZXV5 915 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 POGZQ7Z3K3 1410 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZC3HC1Q86WB0 502 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PRSS35Q8N3Z0 413 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF709Q8N972 641 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PARD3BQ8TEW8 1205 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 SLC44A1Q8WWI5 657 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 LINGO1Q96FE5 620 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PDXPQ96GD0 296 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CALML4Q96GE6 196 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CLPTM1LQ96KA5 538 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 IMMP1LQ96LU5 166 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF597Q96LX8 424 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 C18orf15Q96N68 181 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 AGAP4Q96P64 663 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 MPHOSPH8Q99549 860 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 VRK1Q99986 396 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 APOL2Q9BQE5 337 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 MESP1Q9BRJ9 268 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 UBAC1Q9BSL1 405 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 NPFFR1Q9GZQ6 430 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TRIM45Q9H8W5 580 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 ST7Q9NRC1 585 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 CALCOCO1Q9P1Z2 691 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 KLHL42Q9P2K6 505 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 XPR1Q9UBH6 696 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 USTQ9Y2C2 406 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 AMDHD2Q9Y303 409 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 PCDHA13Q9Y5I0 950 aa-1.19□□□□□ -2.6
SNORA40.16-201ENST00000517238 TNCP24821 2201 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 NT5C1B-RDH14C9J2C7 533 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 E9PAM4 449 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 WWP2O00308 870 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 DLGAP1O14490 977 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SOCS6O14544 535 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SLC22A2O15244 555 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ADCY3O60266 1144 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CNTN5O94779 1100 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 NGFP01138 241 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 GLAP06280 429 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 UQCRFS1P1P0C7P4 283 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 P0C880 135 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CPN1P15169 458 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 EGR1P18146 543 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 MALP21145 153 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 HTR1FP30939 366 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 OPRL1P41146 370 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 NR2C2P49116 596 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 GATMP50440 423 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SUOXP51687 545 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 GTF2H2Q13888 395 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 KIR2DS5Q14953 304 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 TEAD2Q15562 447 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SMAD1Q15797 465 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 AAK1Q2M2I8 961 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CCDC96Q2M329 555 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 GTF2H2CQ6P1K8 395 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 Q6ZRP5 223 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ASB18Q6ZVZ8 466 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 SYVN1Q86TM6 617 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 WDR63Q8IWG1 891 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 CCDC105Q8IYK2 499 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 RNF113BQ8IZP6 322 aaKnown RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ARRDC1Q8N5I2 433 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 ST13P5Q8NFI4 369 aaPredicted RBP-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 FLVCR1-AS1Q8TAF5 88 aa-1.2□□□□□ -2.6
SNORA40.16-201ENST00000517238 DUSP19Q8WTR2 217 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms