RNA–Protein interactions for RNA: ENST00000517126.1

RNU6-1220P-201, Transcript of RNA, U6 small nuclear 1220, pseudogene, humanhuman

BASIC

Gene RNU6-1220P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1220P-201ENST00000517126 HOXC9P31274 260 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SHMT1P34896 483 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 HARS2P49590 506 aaKnown RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 ZBED6P86452 979 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PDE1BQ01064 536 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 ZNF155Q12901 538 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 MYLK3Q32MK0 819 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 DCST1Q5T197 706 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 INTS11Q5TA45 600 aaKnown RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 MTSS1LQ765P7 747 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 NOXA1Q86UR1 476 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 GPR180Q86V85 440 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 RNF113BQ8IZP6 322 aaKnown RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SPATA6LQ8N4H0 392 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PPP4R1Q8TF05 950 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 POMGNT1Q8WZA1 660 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SGCDQ92629 289 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SLC41A2Q96JW4 573 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 QRFPRQ96P65 431 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EIF2AK1Q9BQI3 630 aaKnown RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SLC26A6Q9BXS9 759 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PPP1R3EQ9H7J1 279 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 ZNF556Q9HAH1 456 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 C9orf78Q9NZ63 289 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 KCNG2Q9UJ96 466 aa3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 TRIP12Q14669 1992 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1220P-201ENST00000517126 A0A1B0GVC2 190 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SPINT2O43291 252 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 TNFSF14O43557 240 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 NDUFS3O75489 264 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SLC25A12O75746 678 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PPP1R3DO95685 299 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 IGKV3-20P01619 116 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 LINC00271P0C7V0 271 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 UBL4AP11441 157 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EDN2P20800 178 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 KCNA5P22460 613 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PSMA4P25789 261 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 BSGP35613 385 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FASLGP48023 281 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CASP6P55212 293 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 HNRNPH2P55795 449 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 MAD2L1Q13257 205 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 ZRSR1Q15695 479 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EFNB3Q15768 340 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 TMEM35AQ53FP2 167 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SGO1Q5FBB7 561 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 KCNT1Q5JUK3 1230 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SLC9C2Q5TAH2 1124 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 JAKMIP3Q5VZ66 844 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FRG2Q64ET8 278 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PLEKHA7Q6IQ23 1121 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 TRMT1LQ7Z2T5 733 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 R3HCC1LQ7Z5L2 792 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CPLX4Q7Z7G2 160 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 TMTC2Q8N394 836 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 SPATA3Q8NHX4 192 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 RRP36Q96EU6 259 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PPM1MQ96MI6 270 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 UHRF2Q96PU4 802 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 NR1H4Q96RI1 486 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CSF3RQ99062 836 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 NAP1L4Q99733 375 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 HAUS8Q9BT25 410 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PLEKHA4Q9H4M7 779 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 GAREM1Q9H706 876 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EBF2Q9HAK2 575 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 NOX4Q9NPH5 578 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 ABCF3Q9NUQ8 709 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EHD2Q9NZN4 543 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 UBA2Q9UBT2 640 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 LIMA1Q9UHB6 759 aaKnown RBP3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CEPT1Q9Y6K0 416 aa3.36□□□□□ -1.87
RNU6-1220P-201ENST00000517126 A0A1W2PS18 150 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FAM172BPA6NC97 362 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 DVL1O14640 695 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FGF17O60258 216 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 RTN3O95197 1032 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 AGR2O95994 175 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CHMP24386 653 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EPHA8P29322 1005 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 EIF2S3P41091 472 aaKnown RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PRCPP42785 496 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FMO5P49326 533 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 DVL1P1P54792 670 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 OLR1P78380 273 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PHEXP78562 749 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 HYAL1Q12794 435 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 GRSF1Q12849 480 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 GRIK2Q13002 908 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FGFBP1Q14512 234 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PRICKLE4Q2TBC4 344 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PDSS1Q5T2R2 415 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 GPATCH4Q5T3I0 446 aaKnown RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 FBXO46Q6PJ61 603 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 DLK2Q6UY11 383 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 PQLC2Q6ZP29 291 aa3.35□□□□□ -1.87
RNU6-1220P-201ENST00000517126 CUZD1Q86UP6 607 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms