RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 CCNT2O60583 730 aaKnown RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 AP2A2O94973 939 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 VIL1P09327 827 aaKnown RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CD99P14209 185 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 HOXB9P17482 250 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 GNAZP19086 355 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CYP3A7P24462 503 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 ITGA3P26006 1051 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 PMELP40967 661 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 MECOMQ03112 1051 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 ITGADQ13349 1161 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CAMK1Q14012 370 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CTF1Q16619 201 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 TMEM268Q5VZI3 342 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 MTFR2Q6P444 385 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CRTC1Q6UUV9 634 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZNF841Q6ZN19 808 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 TIPARPQ7Z3E1 657 aaKnown RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 C11orf96Q7Z7L8 435 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 GRAMD1CQ8IYS0 662 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 DCLK2Q8N568 766 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZBTB34Q8NCN2 500 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CHPT1Q8WUD6 406 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 STARD4Q96DR4 205 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 APIPQ96GX9 242 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 MRFAP1L1Q96HT8 127 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 FAR2Q96K12 515 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 C2orf48Q96LS8 159 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 FAM126AQ9BYI3 521 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CCDC8Q9H0W5 538 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 C17orf75Q9HAS0 396 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 PATZ1Q9HBE1 687 aaKnown RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 NOD2Q9HC29 1040 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 MYNNQ9NPC7 610 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 LOC105369274A0A096LPK9 316 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 LOC102723532A0A0G2JNH3 316 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 GXYLT2A0PJZ3 443 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 AKR1B15C9JRZ8 316 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 TNPO2O14787 897 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZNHIT1O43257 154 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 GALR3O60755 368 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 CDC45O75419 566 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 INMTO95050 263 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 WISP3O95389 354 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 LARGE1O95461 756 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ITGA5P08648 1049 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 TFPIP10646 304 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 BRAFP15056 766 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 NCLP19338 710 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 HTR1BP28222 390 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 GRK5P34947 590 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 DDIT3P35638 169 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 EIF2S3P41091 472 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ETV5P41161 510 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 SOX3P41225 446 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 GPR12P47775 334 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 AMPHP49418 695 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 MFAP1P55081 439 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 SEC61BP60468 96 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 EEF1A1P68104 462 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 IGLV3-21P80748 117 aaPredicted RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ARHGAP8P85298 464 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 PDE1BQ01064 536 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 TLE3Q04726 772 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 MBTD1Q05BQ5 628 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZNF234Q14588 700 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 FASTKD3Q14CZ7 662 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 SAFBQ15424 915 aaKnown RBP eCLIP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ARHGAP15Q53QZ3 475 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 EEF1A1P5Q5VTE0 462 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 B3GNT9Q6UX72 402 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 SLC36A4Q6YBV0 504 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 PIWIL4Q7Z3Z4 852 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 C14orf80Q86SX3 495 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 TMC8Q8IU68 726 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 OR4N4Q8N0Y3 316 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 RTL3Q8N8U3 475 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 AQP11Q8NBQ7 271 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 RBM15BQ8NDT2 890 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 MCPH1Q8NEM0 835 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 OR4N2Q8NGD1 307 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZNF519Q8TB69 540 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 NMD3Q96D46 503 aaKnown RBP-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 FRG2BQ96QU4 278 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 RTP3Q9BQQ7 232 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 KATNAL1Q9BW62 490 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 DGCR6LQ9BY27 220 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 P2RY12Q9H244 342 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 ACAD9Q9H845 621 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 CAAP1Q9H8G2 361 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 CNGB3Q9NQW8 809 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 PLSCR3Q9NRY6 295 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 CYSLTR2Q9NS75 346 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 TAB2Q9NYJ8 693 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 PTTG2Q9NZH5 202 aa-0.24□□□□□ -2.45
RNU6-557P-201ENST00000516842 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.25□□□□□ -2.45
RNU6-557P-201ENST00000516842 PANO1I0J062 215 aa-0.25□□□□□ -2.45
RNU6-557P-201ENST00000516842 GABRDO14764 452 aa-0.25□□□□□ -2.45
RNU6-557P-201ENST00000516842 DHHO43323 396 aa-0.25□□□□□ -2.45
RNU6-557P-201ENST00000516842 COQ9O75208 318 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms