RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 HSPB2Q16082 182 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 KIF26BQ2KJY2 2108 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 FAM76BQ5HYJ3 339 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 ZNF667Q5HYK9 610 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 ARMC3Q5W041 872 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 C16orf82Q7Z2V1 217 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 R3HCC1LQ7Z5L2 792 aaKnown RBP3.3□□□□□ -1.88
HERC4-215ENST00000515753 TBC1D26Q86UD7 250 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 CCDC105Q8IYK2 499 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 CREB3L4Q8TEY5 395 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 STAMQ92783 540 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 WBP1Q96G27 269 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 LRFN5Q96NI6 719 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 FIZ1Q96SL8 496 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 CENPOQ9BU64 300 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 IL25Q9H293 177 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 TBC1D29Q9UFV1 150 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 A3GALT2U3KPV4 340 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 MAGI2Q86UL8 1455 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 EEA1Q15075 1411 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 AKNAQ7Z591 1439 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 PASKQ96RG2 1323 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SYNDIG1LA6NDD5 238 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SRRM3A6NNA2 597 aaPredicted RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 BTBD18B2RXH4 712 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SLC16A5O15375 505 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SLC25A17O43808 307 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 KLK8O60259 260 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 LDB3O75112 727 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SOCS5O75159 536 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 PTP4A3O75365 173 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 VNN2O95498 520 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 STARD3NLO95772 234 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 CH25HO95992 272 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 IGHV4-30-4P0DP06 118 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 AKR1B1P15121 316 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ITGB8P26012 769 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ABCD3P28288 659 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 HOXD13P35453 343 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ARL3P36405 182 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 RPL3P39023 403 aaKnown RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 CLCN5P51795 746 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ERVFC1-1P60608 527 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 TUBA1BP68363 451 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 KRT83P78385 493 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 EFNB1P98172 346 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 CALD1Q05682 793 aaKnown RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 GALNT2Q10471 571 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 MAMLD1Q13495 774 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ESCO2Q56NI9 601 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 SNX30Q5VWJ9 437 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 TMEM81Q6P7N7 255 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 INO80CQ6PI98 192 aaPredicted RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 FJX1Q86VR8 437 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 ADSSL1Q8N142 457 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 PLD5Q8N7P1 536 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 RUFY2Q8WXA3 655 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 RTP4Q96DX8 246 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 TXNDC15Q96J42 360 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 MPHOSPH8Q99549 860 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 BAG1Q99933 345 aaPredicted RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 SYNCQ9H7C4 482 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 DDX31Q9H8H2 851 aaKnown RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 ZNF556Q9HAH1 456 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 CYSLTR2Q9NS75 346 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 OR6C3Q9NZP0 311 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 NFKBIL1Q9UBC1 381 aaPredicted RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 PEMTQ9UBM1 199 aa3.29□□□□□ -1.88
HERC4-215ENST00000515753 CFDP1Q9UEE9 299 aaPredicted RBP3.29□□□□□ -1.88
HERC4-215ENST00000515753 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 ATP10BO94823 1461 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 PTPRMP28827 1452 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 PRXQ9BXM0 1461 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 LINC01553A4QN01 128 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 KLRF2D3W0D1 207 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 P4HA2O15460 535 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 TSPAN9O75954 239 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 F9P00740 461 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 DNTTP04053 509 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 CLEC3BP05452 202 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 URODP06132 367 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 HOXB5P09067 269 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 LAMP2P13473 410 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 SLC2A4P14672 509 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 PAFAH1B1P43034 410 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 GABRB2P47870 512 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 EFNA5P52803 228 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 RAD23BP54727 409 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 CLDN2P57739 230 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 ACVR2BQ13705 512 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 CAMK1Q14012 370 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 WTAPQ15007 396 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 TAF11Q15544 211 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 CDC37Q16543 378 aaPredicted RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 SETMARQ53H47 684 aaPredicted RBP3.28□□□□□ -1.88
HERC4-215ENST00000515753 RILPL1Q5EBL4 403 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 TXNDC8Q6A555 127 aa3.28□□□□□ -1.88
HERC4-215ENST00000515753 SLC30A6Q6NXT4 461 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms