RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 IL17CQ9P0M4 197 aa10.21□□□□□ -0.77
SNF8-214ENST00000515174 CLEC4EQ9ULY5 219 aa10.21□□□□□ -0.77
SNF8-214ENST00000515174 SORCS3Q9UPU3 1222 aa10.21□□□□□ -0.77
SNF8-214ENST00000515174 RUVBL2Q9Y230 463 aaKnown RBP10.21□□□□□ -0.77
SNF8-214ENST00000515174 CCL26Q9Y258 94 aa10.21□□□□□ -0.77
SNF8-214ENST00000515174 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.21□□□□□ -0.77
SNF8-214ENST00000515174 KCTD3Q9Y597 815 aa10.21□□□□□ -0.77
SNF8-214ENST00000515174 A0A0J9YYE9 177 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 CCDC78A2IDD5 438 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 MYO1CO00159 1063 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 STX7O15400 261 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 HNRNPCL1O60812 293 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 POP4O95707 220 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 TRBC1P01850 177 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 LTA4HP09960 611 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 SBK3P0C264 359 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 PABPC1P11940 636 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 SRCP12931 536 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 FDXRP22570 491 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 CD70P32970 193 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 MAGEA9P43362 315 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 SCTRP47872 440 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 SLC1A6P48664 564 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 TTPAP49638 278 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 ARFIP2P53365 341 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 NTHL1P78549 312 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 RAD51Q06609 339 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 BCL2L1Q07817 233 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 HYAL1Q12794 435 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 CDKN3Q16667 212 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 MYLK3Q32MK0 819 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 AARS2Q5JTZ9 985 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 DGKKQ5KSL6 1271 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 CES4AQ5XG92 561 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 CERS6Q6ZMG9 384 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 TPGS1Q6ZTW0 290 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 GRASPQ7Z6J2 395 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 TBC1D1Q86TI0 1168 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 RNF135Q8IUD6 432 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 WDR75Q8IWA0 830 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 KIRREL3Q8IZU9 778 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 STK40Q8N2I9 435 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 FSTL5Q8N475 847 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 C12orf76Q8N812 135 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 OR4K2Q8NGD2 314 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 OR13C4Q8NGS5 318 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 PIWIL2Q8TC59 973 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 DTX3LQ8TDB6 740 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 HCAR2Q8TDS4 363 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 WFIKKN2Q8TEU8 576 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 PBXIP1Q96AQ6 731 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 VOPP1Q96AW1 172 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 ELMO2Q96JJ3 720 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 AARSD1Q9BTE6 412 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 TRPV4Q9HBA0 871 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 FBXO6Q9NRD1 293 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 ABCF3Q9NUQ8 709 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 DZANK1Q9NVP4 752 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 ZNF358Q9NW07 568 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 MYOFQ9NZM1 2061 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 MARCH4Q9P2E8 410 aaPredicted RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 CDH22Q9UJ99 828 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 SLC27A6Q9Y2P4 619 aa10.2□□□□□ -0.78
SNF8-214ENST00000515174 FCF1Q9Y324 198 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 MRPS23Q9Y3D9 190 aaKnown RBP10.2□□□□□ -0.78
SNF8-214ENST00000515174 MYLKQ15746 1914 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 CFAP73A6NFT4 308 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 TMEM221A6NGB7 291 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 M0R296 226 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 AURKAO14965 403 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 PHGDHO43175 533 aaKnown RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 SMAD6O43541 496 aaKnown RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 NPHS1O60500 1241 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 GFRA3O60609 400 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 ASLP04424 464 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 MYL2P10916 166 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 TYRP14679 529 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 KCNA4P22459 653 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 ATP5F1P24539 256 aaPredicted RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 PMLP29590 882 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 SERPINA4P29622 427 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 PPARGP37231 505 aaPredicted RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 NAA20P61599 178 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 XIAPP98170 497 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 ECT2LQ008S8 904 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 IRF9Q00978 393 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 GALNT1Q10472 559 aaPredicted RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 KRT72Q14CN4 511 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 SMAD2Q15796 467 aaKnown RBP10.19□□□□□ -0.78
SNF8-214ENST00000515174 CARD16Q5EG05 197 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 ZNF789Q5FWF6 425 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 LYPLAL1Q5VWZ2 237 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 LIPMQ5VYY2 423 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 ZDHHC20Q5W0Z9 365 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 LRRC8EQ6NSJ5 796 aa10.19□□□□□ -0.78
SNF8-214ENST00000515174 KLC3Q6P597 504 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms