RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 SPATS1Q496A3 300 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 COQ5Q5HYK3 327 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 CLLU1OSQ5K130 101 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 C6orf52Q5T4I8 152 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 KANK2Q63ZY3 851 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 RAP1GAP2Q684P5 730 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 PRMT9Q6P2P2 845 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 BORAQ6PGQ7 559 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 RTN4RL1Q86UN2 441 aaPredicted RBP17.5■□□□□ 0.39
SNX2-213ENST00000514949 GOLM1Q8NBJ4 401 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 OR52K2Q8NGK3 314 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 DDI1Q8WTU0 396 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 ZUFSPQ96AP4 578 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 PBXIP1Q96AQ6 731 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 EME1Q96AY2 570 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 AARSD1Q9BTE6 412 aaKnown RBP17.5■□□□□ 0.39
SNX2-213ENST00000514949 EFHD1Q9BUP0 239 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 OSBPL11Q9BXB4 747 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNX2-213ENST00000514949 INTS10Q9NVR2 710 aaKnown RBP17.5■□□□□ 0.39
SNX2-213ENST00000514949 ARMC1Q9NVT9 282 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 COMMD8Q9NX08 183 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 NDUFAF1Q9Y375 327 aa17.5■□□□□ 0.39
SNX2-213ENST00000514949 TTC24A2A3L6 582 aaPredicted RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 TRPA1O75762 1119 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 PGM3O95394 542 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 MATN4O95460 622 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 HSPA8P11142 646 aaKnown RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 CST5P28325 142 aaPredicted RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 ATXN3P54252 364 aaPredicted RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 NAA20P61599 178 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 IKBKEQ14164 716 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 ADRM1Q16186 407 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 KCNA10Q16322 511 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 SLC24A5Q71RS6 500 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 RAB44Q7Z6P3 723 aaPredicted RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 PTGR2Q8N8N7 351 aaPredicted RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 OR9I1Q8NGQ6 314 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 OR4L1Q8NH43 312 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
SNX2-213ENST00000514949 CNBD2Q96M20 576 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 TRIB3Q96RU7 358 aa17.49■□□□□ 0.39
SNX2-213ENST00000514949 C7orf72A4D263 438 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 AZIN1O14977 448 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 MUSKO15146 869 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 TBX18O95935 607 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 RALGDSQ12967 914 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 SEMA3AQ14563 771 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 OR4D1Q15615 310 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 GALNT4Q8N4A0 578 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 MINDY1Q8N5J2 469 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 TSPEARQ8WU66 669 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 KIAA1191Q96A73 305 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 RBM38Q9H0Z9 239 aaKnown RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 COQ10BQ9H8M1 238 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 FBRSL1Q9HCM7 1045 aaKnown RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 SDR39U1Q9NRG7 319 aaPredicted RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 CATSPERZQ9NTU4 200 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 ARL5AQ9Y689 179 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 VILLO15195 856 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 BMP2P12643 396 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 OR1E1P30953 314 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 ACVRL1P37023 503 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 CACNB2Q08289 660 aaPredicted RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 GK3PQ14409 553 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 RETREG3Q86VR2 466 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 DHFR2Q86XF0 187 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 HERC6Q8IVU3 1022 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 ANKFN1Q8N957 763 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 LRTOMTQ8WZ04 291 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 FBXO32Q969P5 355 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 RPRD1AQ96P16 312 aaPredicted RBP17.48■□□□□ 0.39
SNX2-213ENST00000514949 DERL2Q9GZP9 239 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 SYTL2Q9HCH5 934 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 PTTG2Q9NZH5 202 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 MAP10Q9P2G4 905 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 ANKRD36A6QL64 1941 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 CENPFP49454 3210 aa17.48■□□□□ 0.39
SNX2-213ENST00000514949 A0A0J9YYE9 177 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ATP6AP2A0A1C7CYW4 349 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 OR6C75A6NL08 312 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
SNX2-213ENST00000514949 KERAO60938 352 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 VPS4BO75351 444 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ATP6AP2O75787 350 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 NDST3O95803 873 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ZDHHC11BP0C7U3 371 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 HSD17B1P14061 328 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ETFBP38117 255 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 KPNA1P52294 538 aaPredicted RBP17.47■□□□□ 0.39
SNX2-213ENST00000514949 SLC7A2P52569 658 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 CDH13P55290 713 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 GRIK2Q13002 908 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 SLC5A9Q2M3M2 681 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 CARM1Q86X55 608 aa17.47■□□□□ 0.39
SNX2-213ENST00000514949 ZNF354CQ86Y25 554 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms