RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CDH8P55286 799 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 CRYZQ08257 329 aaKnown RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 SOWAHCQ53LP3 525 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 PPP6R3Q5H9R7 873 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 LRIF1Q5T3J3 769 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 JADE1Q6IE81 842 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 C8orf82Q6P1X6 216 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 HJURPQ8NCD3 748 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 B4GALNT2Q8NHY0 566 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 NSMCE1Q8WV22 266 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 ZBTB9Q96C00 473 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 NSUN4Q96CB9 384 aaKnown RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 ELMOD3Q96FG2 381 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 RSRC1Q96IZ7 334 aaKnown RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 SLC25A33Q9BSK2 321 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 SH2D4AQ9H788 454 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 CNGB3Q9NQW8 809 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 HIF1ANQ9NWT6 349 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 ZNF215Q9UL58 517 aaPredicted RBP5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 MTMR6Q9Y217 621 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
HMGCS1-207ENST00000514610 CKAP5Q14008 2032 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 LINC01553A4QN01 128 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 SCAMP1O15126 338 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 NDUFS3O75489 264 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 HOXC6P09630 235 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 ALOX12P18054 663 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 PSMB10P40306 273 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 GALCP54803 685 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 PRAMEP78395 509 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 CRYMQ14894 314 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 TMEM154Q6P9G4 183 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 CFAP77Q6ZQR2 320 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 ADGRF2Q8IZF7 708 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 TERF2IPQ9NYB0 399 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 CLIC4Q9Y696 253 aa5.18□□□□□ -1.58
HMGCS1-207ENST00000514610 IGLV5-52A0A0A0MRZ9 124 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 AKR1B15C9JRZ8 316 aaPredicted RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 NTN1O95631 604 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 CLTBP09497 229 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 PORP16435 677 aaPredicted RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SSTR2P30874 369 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 CUL4AQ13619 759 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 ACVR2BQ13705 512 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 DHX34Q14147 1143 aaKnown RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SETMARQ53H47 684 aaPredicted RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 GGNBP1Q5YKI7 109 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 PMS2CLQ68D20 193 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 METTL2BQ6P1Q9 378 aaKnown RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 C16orf54Q6UWD8 224 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 TAOK1Q7L7X3 1001 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 FJX1Q86VR8 437 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 CLIP4Q8N3C7 705 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 OR2AK2Q8NG84 335 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SGCDQ92629 289 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 METTL2AQ96IZ6 378 aaKnown RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 OR2A14Q96R47 310 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SRSF8Q9BRL6 282 aaKnown RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 PCGF1Q9BSM1 259 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SEBOXQ9HB31 216 aaPredicted RBP5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 LTB4R2Q9NPC1 389 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 NSMCE4AQ9NXX6 385 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 FBXL17Q9UF56 701 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SWAP70Q9UH65 585 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 SESN1Q9Y6P5 492 aa5.17□□□□□ -1.58
HMGCS1-207ENST00000514610 EVPLQ92817 2033 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 hCG_1807616A0A1W2PRN6 198 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 hDV102S1A0JD36 115 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SOCS6O14544 535 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 PLRG1O43660 514 aaKnown RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 JRKO75564 520 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SERPINI2O75830 405 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 DDNO94850 711 aaPredicted RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ALPLP05186 524 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 RB1P06400 928 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ZNF12P17014 697 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 STX2P32856 288 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 PIK3CAP42336 1068 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 HTR6P50406 440 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 BRWD1-AS2P59051 145 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ADIPOQQ15848 244 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 AMZ1Q400G9 498 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SIGIRRQ6IA17 410 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ZNF280DQ6N043 979 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SLC36A4Q6YBV0 504 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 TICAM1Q8IUC6 712 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 DSELQ8IZU8 1212 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 PGBD5Q8N414 524 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SRBD1Q8N5C6 995 aaKnown RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 WASF1Q92558 559 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 RHBDF1Q96CC6 855 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 GRAMD2BQ96HH9 432 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 EGLN2Q96KS0 407 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 CSF3RQ99062 836 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 SEPT5Q99719 369 aaPredicted RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 TMX4Q9H1E5 349 aaPredicted RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 PLK3Q9H4B4 646 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 C17orf75Q9HAS0 396 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ACSS1Q9NUB1 689 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms