RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HSD11B1LQ7Z5J1 315 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 FAM124AQ86V42 546 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 OR4K2Q8NGD2 314 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 CXorf40AQ8TE69 158 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 CFAP36Q96G28 342 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 DNAJC1Q96KC8 554 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 COQ10AQ96MF6 247 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 WRAP53Q9BUR4 548 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 TPSD1Q9BZJ3 242 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 BPIFA1Q9NP55 256 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 PLXNA2O75051 1894 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 C10orf142B7Z368 130 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 H7C0S8 307 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 AXIN1O15169 862 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 MMP20O60882 483 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 SPAG6O75602 509 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 PCDH8O95206 1070 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 SLC4A1P02730 911 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 TDGF1P13385 188 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 C6P13671 934 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 H2AFXP16104 143 aaPredicted RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 BPIP17213 487 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 GM2AP17900 193 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 PAMP19021 973 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 SSTR1P30872 391 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 ACSL1P33121 698 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 PTPN5P54829 565 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 MAP7D1Q3KQU3 841 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 ZDHHC20Q5W0Z9 365 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 KIAA0930Q6ICG6 404 aaPredicted RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 KIAA1161Q6NSJ0 714 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 CYS1Q717R9 158 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 TECPR1Q7Z6L1 1165 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 C1orf210Q8IVY1 113 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 NRSN1Q8IZ57 195 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 MREGQ8N565 214 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 DTWD2Q8NBA8 298 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDPN-210ENST00000513143 OR2T34Q8NGX1 318 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 CDKN2AIPNLQ96HQ2 116 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 TBATAQ96M53 351 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 WSB2Q9NYS7 404 aaPredicted RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 PKD2L2Q9NZM6 624 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 NFKBIL1Q9UBC1 381 aaPredicted RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 CYP8B1Q9UNU6 501 aa12.51□□□□□ -0.41
PDPN-210ENST00000513143 ZFR2Q9UPR6 939 aaKnown RBP12.51□□□□□ -0.41
PDPN-210ENST00000513143 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 KMT2EQ8IZD2 1858 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 BPTFQ12830 3046 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3DA0A087WVF3 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3IA0A087WXS9 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3EA0A087X179 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3KA0A087X1G2 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3FA6NER0 549 aaPredicted RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 IGLON5A6NGN9 336 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3LB9A6J9 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 WNT9AO14904 365 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 RIPK2O43353 540 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 RPP40O75818 363 aaKnown RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 TM7SF2O76062 418 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 SEMA4FO95754 770 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3HP0C7X1 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 ARNTP27540 789 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 CD6P30203 668 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 AVPR2P30518 371 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 ETV3P41162 512 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 ARCN1P48444 511 aaKnown RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 ARSDP51689 593 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 DCDC1P59894 354 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 ACOX1Q15067 660 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 AGERQ15109 404 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 LONRF1Q17RB8 773 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TMEM259Q4ZIN3 620 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 UBAP2Q5T6F2 1119 aaKnown RBP12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3GQ6DHY5 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 TBC1D3CQ6IPX1 549 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 RFLNAQ6ZTI6 216 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 Q6ZVL8 140 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 CYP2U1Q7Z449 544 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
PDPN-210ENST00000513143 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms