RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 KDM4BO94953 1096 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 PMS2P2O95744 297 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 NFKBIAP25963 317 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 BDKRB2P30411 391 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 GNL1P36915 607 aaPredicted RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 FOXM1Q08050 763 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 GRSF1Q12849 480 aaKnown RBP eCLIP5.37□□□□□ -1.55
CHD1-209ENST00000512844 TMEM115Q12893 351 aaPredicted RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 TBCEQ15813 527 aaPredicted RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 C2orf68Q2NKX9 166 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 UNQ6126/PRO20091Q6UXV3 157 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 QSOX2Q6ZRP7 698 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 ARMC9Q7Z3E5 817 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 HAPLN4Q86UW8 402 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 PDILTQ8N807 584 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 SMRP1Q8NCR6 262 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 WFIKKN2Q8TEU8 576 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 SECTM1Q8WVN6 248 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 TMEM19Q96HH6 336 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 MPP4Q96JB8 637 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 ESRP2Q9H6T0 727 aaKnown RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 FBRSL1Q9HCM7 1045 aaKnown RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 PLSCR4Q9NRQ2 329 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 OLA1Q9NTK5 396 aaKnown RBP5.37□□□□□ -1.55
CHD1-209ENST00000512844 EHD2Q9NZN4 543 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 CAPN7Q9Y6W3 813 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 MAU2Q9Y6X3 613 aa5.37□□□□□ -1.55
CHD1-209ENST00000512844 NPIPB15A6NHN6 443 aaPredicted RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 HNRNPCL2B2RXH8 293 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 SLC25A12O75746 678 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 NKX2-2O95096 273 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 TBX18O95935 607 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 CLEC3BP05452 202 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 SNRNP70P08621 437 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 IL7RP16871 459 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 CHMP24386 653 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 PSMA4P25789 261 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 RPS3AP61247 264 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 CSNK2A1P68400 391 aaPredicted RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 EEF1A2Q05639 463 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 DDX10Q13206 875 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 IRAK1BP1Q5VVH5 260 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 PLEKHA7Q6IQ23 1121 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 ANKRD54Q6NXT1 300 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 PQLC2Q6ZP29 291 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 RSRC2Q7L4I2 434 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 FRMD1Q8N878 549 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 CSNK2A3Q8NEV1 391 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 TDRD7Q8NHU6 1098 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 RND1Q92730 232 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 HDAC2Q92769 488 aaKnown RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 IL17FQ96PD4 163 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 MAP7D2Q96T17 732 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 USP44Q9H0E7 712 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 RRP7BPQ9NSQ0 103 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 SMC4Q9NTJ3 1288 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 MCM9Q9NXL9 1143 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 ORC3Q9UBD5 711 aaPredicted RBP5.36□□□□□ -1.55
CHD1-209ENST00000512844 POU2F3Q9UKI9 436 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 ICAM5Q9UMF0 924 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 AMDHD2Q9Y303 409 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 LOXL2Q9Y4K0 774 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
CHD1-209ENST00000512844 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 VCYO14598 125 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 MAN1A1P33908 653 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 ARL3P36405 182 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 TMPOP42166 694 aaKnown RBP5.35□□□□□ -1.55
CHD1-209ENST00000512844 F2RL1P55085 397 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 NLRP5P59047 1200 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 MPP1Q00013 466 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 CSTF3Q12996 717 aaKnown RBP5.35□□□□□ -1.55
CHD1-209ENST00000512844 ALG11Q2TAA5 492 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 PAPPA-AS1Q5QFB9 102 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 NR2C2APQ86WQ0 139 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 PPHLN1Q8NEY8 458 aaKnown RBP5.35□□□□□ -1.55
CHD1-209ENST00000512844 KCNG4Q8TDN1 519 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 POMGNT1Q8WZA1 660 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 RRNAD1Q96FB5 475 aaKnown RBP5.35□□□□□ -1.55
CHD1-209ENST00000512844 LMLNQ96KR4 655 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 EPYCQ99645 322 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 STRA6Q9BX79 667 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 DDX31Q9H8H2 851 aaKnown RBP5.35□□□□□ -1.55
CHD1-209ENST00000512844 KRT84Q9NSB2 600 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 AASSQ9UDR5 926 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 LRP12Q9Y561 859 aa5.35□□□□□ -1.55
CHD1-209ENST00000512844 IGHV4OR15-8A0A075B7B6 117 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 FAM237AA0A1B0GTK4 181 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 B4E171 279 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 HS3ST1O14792 307 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 BUB3O43684 328 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 PAGE4O60829 102 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 LDB3O75112 727 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 NDUFS3O75489 264 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 PPP1R3DO95685 299 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 EGFP01133 1207 aa5.34□□□□□ -1.55
CHD1-209ENST00000512844 AFPP02771 609 aaKnown RBP5.34□□□□□ -1.55
CHD1-209ENST00000512844 PAX3P23760 479 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms