RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 WDFY4Q6ZS81 3184 aa16.73■□□□□ 0.27
SCAMP1-203ENST00000510030 ZNF106Q9H2Y7 1883 aaKnown RBP16.73■□□□□ 0.27
SCAMP1-203ENST00000510030 NPIPB15A6NHN6 443 aaPredicted RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 AP1G1O43747 822 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 RNF40O75150 1001 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 C1QAP02745 245 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 SNRPAP09012 282 aaKnown RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 ERVK-10P10266 1014 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 C7P10643 843 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 ADRB3P13945 408 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 TIMP2P16035 220 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 KRT15P19012 456 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 SPAM1P38567 509 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 MMP12P39900 470 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 SLCO1A2P46721 670 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 PSMD8P48556 350 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 TTPAP49638 278 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 STARD6P59095 220 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 DCDC1P59894 354 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 SATB1Q01826 763 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 TEDDM1Q5T9Z0 273 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 EMC10Q5UCC4 262 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 LYPLAL1Q5VWZ2 237 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 ZNF470Q6ECI4 717 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 CRTC1Q6UUV9 634 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 ZSWIM9Q86XI8 627 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 MMAAQ8IVH4 418 aaKnown RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 TXNDC5Q8NBS9 432 aaKnown RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 EZH1Q92800 747 aaPredicted RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 HDAC10Q969S8 669 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 MTG2Q9H4K7 406 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 PCDH12Q9NPG4 1184 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 INTS10Q9NVR2 710 aaKnown RBP16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 B4GALT6Q9UBX8 382 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 HCN2Q9UL51 889 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 F5P12259 2224 aa16.72■□□□□ 0.27
SCAMP1-203ENST00000510030 GOLGA8CPA6NN73 597 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 CHURC1-FNTBB4DL54 471 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 NEMP1O14524 444 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 TSPAN6O43657 245 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 SLC4A1P02730 911 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 PRKCGP05129 697 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 ELFN1P0C7U0 828 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 ITGALP20701 1170 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 PMLP29590 882 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 CACNG1Q06432 222 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 ITGA9Q13797 1035 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 TMED2Q15363 201 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 PACS1Q6VY07 963 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 NRSN1Q8IZ57 195 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 C2CD4AQ8NCU7 369 aaPredicted RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 OR13C4Q8NGS5 318 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 DCAKDQ8WVC6 231 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 ALKBH8Q96BT7 664 aaKnown RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 TRIM56Q9BRZ2 755 aaKnown RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 IER2Q9BTL4 223 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 POLMQ9NP87 494 aaPredicted RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 IARS2Q9NSE4 1012 aaKnown RBP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 EURLQ9NYK6 297 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 BCCIPQ9P287 314 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 SLC2A6Q9UGQ3 507 aa16.71■□□□□ 0.27
SCAMP1-203ENST00000510030 TRIOO75962 3097 aa16.71■□□□□ 0.26
SCAMP1-203ENST00000510030 GLYATL1P3A0A0U1RQE8 302 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 KANSL1LA0AUZ9 987 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CCDC78A2IDD5 438 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CD3EAPO15446 510 aaKnown RBP16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CLDN7O95471 211 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 SYF2O95926 243 aaKnown RBP16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 PYGLP06737 847 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 ARNTP27540 789 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 DGKEP52429 567 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 STC1P52823 247 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CDKN3Q16667 212 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 STRA8Q7Z7C7 330 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CILP2Q8IUL8 1156 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 KRT222Q8N1A0 295 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 RPLP0P6Q8NHW5 317 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 ULK4Q96C45 1275 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 TBATAQ96M53 351 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 RBBP8Q99708 897 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 OMDQ99983 421 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 RHOJQ9H4E5 214 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 FBXO5Q9UKT4 447 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 SARDHQ9UL12 918 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 CA14Q9ULX7 337 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 NDRG2Q9UN36 371 aaKnown RBP16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 NCKAP1Q9Y2A7 1128 aa16.7■□□□□ 0.26
SCAMP1-203ENST00000510030 SCN8AQ9UQD0 1980 aa16.69■□□□□ 0.26
SCAMP1-203ENST00000510030 CCDC162PA2VCL2 907 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms