RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 MANEAQ5SRI9 462 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 FAM182AQ5T1J6 154 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 DCUN1D2Q6PH85 259 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 TECPR1Q7Z6L1 1165 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 ZNF761Q86XN6 746 aaPredicted RBP13.36□□□□□ -0.27
DDX41-210ENST00000509576 ZDHHC1Q8WTX9 485 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 NUS1Q96E22 293 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 AGAP2Q99490 1192 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 SP110Q9HB58 689 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 OCIAD1Q9NX40 245 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 SLC17A4Q9Y2C5 497 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 B3GALT1Q9Y5Z6 326 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 LRRK2Q5S007 2527 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 IGHV1OR21-1A0A087WYE8 117 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 LIFP15018 202 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 ADCY8P40145 1251 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 AP1S1P61966 158 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 UBXN1Q04323 297 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 ARHGEF7Q14155 803 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 PPP6R3Q5H9R7 873 aaPredicted RBP13.35□□□□□ -0.27
DDX41-210ENST00000509576 CFAP58Q5T655 872 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 ZNF571Q7Z3V5 609 aaPredicted RBP13.35□□□□□ -0.27
DDX41-210ENST00000509576 CPNE8Q86YQ8 564 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 BMPERQ8N8U9 685 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 SCARF2Q96GP6 870 aaPredicted RBP13.35□□□□□ -0.27
DDX41-210ENST00000509576 MCCC1Q96RQ3 725 aaPredicted RBP13.35□□□□□ -0.27
DDX41-210ENST00000509576 CMKLR1Q99788 373 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
DDX41-210ENST00000509576 USP9XQ93008 2570 aaPredicted RBP13.34□□□□□ -0.27
DDX41-210ENST00000509576 DDX3XO00571 662 aaKnown RBP eCLIP13.34□□□□□ -0.27
DDX41-210ENST00000509576 THRAP10827 490 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 CTPS1P17812 591 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 VIPR1P32241 457 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 UGT1A3P35503 534 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 LIMK2P53671 638 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 TMCO4Q5TGY1 634 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 PIM3Q86V86 326 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 PIH1D2Q8WWB5 315 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 TMEM159Q96B96 161 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 NUDCD1Q96RS6 583 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 WDR24Q96S15 920 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 TRNAU1APQ9NX07 287 aaKnown RBP13.34□□□□□ -0.27
DDX41-210ENST00000509576 SEPT3Q9UH03 358 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 CD84Q9UIB8 345 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 TMEM98Q9Y2Y6 226 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 PCDHGA3Q9Y5H0 932 aa13.34□□□□□ -0.27
DDX41-210ENST00000509576 TNRC6AQ8NDV7 1962 aaKnown RBP13.34□□□□□ -0.27
DDX41-210ENST00000509576 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 DUX1O43812 170 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 FZD6O60353 706 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 SOCS5O75159 536 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 PGLSO95336 258 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 CPP00450 1065 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 IVLP07476 585 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 FERP16591 822 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 KELP23276 732 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 HCAR3P49019 387 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 DPYSL2Q16555 572 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 COLEC12Q5KU26 742 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 DOK6Q6PKX4 331 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 TIPARPQ7Z3E1 657 aaKnown RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 POLNQ7Z5Q5 900 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 ART4Q93070 314 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 RNF31Q96EP0 1072 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 PCMTD1Q96MG8 357 aaPredicted RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.28
DDX41-210ENST00000509576 OAS3Q9Y6K5 1087 aaKnown RBP13.33□□□□□ -0.28
DDX41-210ENST00000509576 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 HGSO14964 777 aaPredicted RBP13.32□□□□□ -0.28
DDX41-210ENST00000509576 PRLP01236 227 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 IL4RP24394 825 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 MYL5Q02045 173 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 PTSQ03393 145 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 PYCR3Q53H96 274 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 ANKS6Q68DC2 871 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 PTRH1Q86Y79 214 aaKnown RBP13.32□□□□□ -0.28
DDX41-210ENST00000509576 OR4D9Q8NGE8 314 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 KIAA1524Q8TCG1 905 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 SLC37A2Q8TED4 501 aa13.32□□□□□ -0.28
DDX41-210ENST00000509576 SCRN2Q96FV2 425 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms