RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FAM228BP0C875 321 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 CCNB1P14635 433 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 GPR1P46091 355 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 EPHB1P54762 984 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 SKOR1P84550 965 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 HLTFQ14527 1009 aaKnown RBP eCLIP15.37■□□□□ 0.05
TPM3-219ENST00000509409 AMZ1Q400G9 498 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 ZFYVE27Q5T4F4 411 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 PHF19Q5T6S3 580 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 ZNF605Q86T29 641 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 TSPAN33Q86UF1 283 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 CBARPQ8N350 705 aaPredicted RBP15.37■□□□□ 0.05
TPM3-219ENST00000509409 GPBAR1Q8TDU6 330 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 SEMA3CQ99985 751 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 TEX101Q9BY14 249 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 SPATS2LQ9NUQ6 558 aaKnown RBP15.37■□□□□ 0.05
TPM3-219ENST00000509409 SUFUQ9UMX1 484 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 LOXL2Q9Y4K0 774 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 TTLL3Q9Y4R7 772 aa15.37■□□□□ 0.05
TPM3-219ENST00000509409 NPIPB15A6NHN6 443 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 PSMD11O00231 422 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 NUDT21O43809 227 aaKnown RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 C1QL1O75973 258 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 FGF1P05230 155 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CD48P09326 243 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 LHCGRP22888 699 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 IL4RP24394 825 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 AK4P27144 223 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 ALDH4A1P30038 563 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CCKBRP32239 447 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 PBX1P40424 430 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 POLD2P49005 469 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 MAZP56270 477 aaKnown RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 OR1D5P58170 312 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CDK3Q00526 305 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CLN3Q13286 438 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 SLC30A9Q6PML9 568 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 SPRED1Q7Z699 444 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 PIM3Q86V86 326 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 ZNF843Q8N446 348 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 ZNF564Q8TBZ8 553 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 PIH1D2Q8WWB5 315 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 IQCDQ96DY2 449 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CCNL2Q96S94 520 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 FRMD8Q9BZ67 464 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 POLR1EQ9GZS1 481 aaKnown RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 RBM22Q9NW64 420 aaKnown RBP eCLIP15.36■□□□□ 0.05
TPM3-219ENST00000509409 TRNAU1APQ9NX07 287 aaKnown RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 AKAP7Q9P0M2 348 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 TAAR2Q9P1P5 351 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 CTTNBP2NLQ9P2B4 639 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 RCOR3Q9P2K3 495 aaPredicted RBP15.36■□□□□ 0.05
TPM3-219ENST00000509409 CD84Q9UIB8 345 aa15.36■□□□□ 0.05
TPM3-219ENST00000509409 A0A0U1RQS6 177 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 CAPN8A6NHC0 703 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 K7ENP7 123 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 MATN3O15232 486 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 MAP3K6O95382 1288 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 ECEL1O95672 775 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 FUCA1P04066 466 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 PDHA1P08559 390 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 CES1P23141 567 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 GARSP41250 739 aaKnown RBP15.35■□□□□ 0.05
TPM3-219ENST00000509409 MAPK10P53779 464 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 B4GALNT1Q00973 533 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 ZFP36L1Q07352 338 aaKnown RBP15.35■□□□□ 0.05
TPM3-219ENST00000509409 PEX6Q13608 980 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 MAP9Q49MG5 647 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 KIAA1614Q5VZ46 1190 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
TPM3-219ENST00000509409 INO80CQ6PI98 192 aaPredicted RBP15.35■□□□□ 0.05
TPM3-219ENST00000509409 PCSK4Q6UW60 755 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 USP53Q70EK8 1073 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 TECPR1Q7Z6L1 1165 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 NRROSQ86YC3 692 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 MAP7D3Q8IWC1 876 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 TEX26Q8N6G2 289 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 AP2M1Q96CW1 435 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 WBP1Q96G27 269 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 CMKLR1Q99788 373 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 ABCG8Q9H221 673 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 TMEM98Q9Y2Y6 226 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 PPIL1Q9Y3C6 166 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 PCDHGA7Q9Y5G6 932 aa15.35■□□□□ 0.05
TPM3-219ENST00000509409 B4GAT1O43505 415 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 MFSD11O43934 449 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 ITIH1P19827 911 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 TEAD1P28347 426 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 ADCY8P40145 1251 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 PPM1FP49593 454 aaPredicted RBP15.34■□□□□ 0.05
TPM3-219ENST00000509409 CTBSQ01459 385 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 PTSQ03393 145 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 DPYSL3Q14195 570 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 PAFAH1B3Q15102 231 aaKnown RBP15.34■□□□□ 0.05
TPM3-219ENST00000509409 IFI16Q16666 785 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms