RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TPM4P67936 248 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 NIPAL4Q0D2K0 466 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 KRT81Q14533 505 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 ACOX1Q15067 660 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 PAFAH1B3Q15102 231 aaKnown RBP10.91□□□□□ -0.66
RNF4-212ENST00000509258 SLC18A3Q16572 532 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 ANKRD20A8PQ5CZ79 823 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 KIAA1614Q5VZ46 1190 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 DENND2CQ68D51 928 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 RAB11FIP2Q7L804 512 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 B3GNT8Q7Z7M8 397 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 VSTM4Q8IW00 320 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 MAML1Q92585 1016 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 FAF2Q96CS3 445 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 WDR92Q96MX6 357 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 SEMA3CQ99985 751 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 CTTNBP2NLQ9P2B4 639 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 ACSL6Q9UKU0 697 aa10.91□□□□□ -0.66
RNF4-212ENST00000509258 SDK2Q58EX2 2172 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 A0A1W2PQM1 296 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 C3orf70A6NLC5 250 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 FZD6O60353 706 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 SOCS5O75159 536 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 PRLP01236 227 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 RPLP0P05388 317 aaKnown RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 HLA-DQB2P05538 268 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 CCKBRP32239 447 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 VIPR1P32241 457 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 UGT1A5P35504 534 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 TRIM23P36406 574 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 GARSP41250 739 aaKnown RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 POLD2P49005 469 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 RENBPP51606 427 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 KIAA1024LP59773 190 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 PEX6Q13608 980 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 TSR1Q2NL82 804 aaKnown RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 PNCKQ6P2M8 343 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 Q6ZVL8 140 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 B4GALNT4Q76KP1 1039 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 NRROSQ86YC3 692 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 JAMLQ86YT9 394 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 BBS5Q8N3I7 341 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 FBXO39Q8N4B4 442 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 ARRDC2Q8TBH0 407 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 TMEM159Q96B96 161 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 NUS1Q96E22 293 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 DTD2Q96FN9 168 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 MCCC1Q96RQ3 725 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 RBM15Q96T37 977 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNF4-212ENST00000509258 AGAP2Q99490 1192 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 FOXP3Q9BZS1 431 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 BRD8Q9H0E9 1235 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 TMEM168Q9H0V1 697 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 SUDS3Q9H7L9 328 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 AKAP7Q9P0M2 348 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 RCOR3Q9P2K3 495 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 CD84Q9UIB8 345 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 GPR34Q9UPC5 381 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 PLEKHM1Q9Y4G2 1056 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 HYOU1Q9Y4L1 999 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 PCYT1BQ9Y5K3 369 aaPredicted RBP10.9□□□□□ -0.66
RNF4-212ENST00000509258 DGKBQ9Y6T7 804 aa10.9□□□□□ -0.66
RNF4-212ENST00000509258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.89□□□□□ -0.67
RNF4-212ENST00000509258 SLC28A2O43868 658 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 NOBOXO60393 691 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 MFAP3LO75121 409 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CEACAM5P06731 702 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 MMP2P08253 660 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 JMJD7P0C870 316 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 SLC5A2P31639 672 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 HSPA9P38646 679 aaKnown RBP10.89□□□□□ -0.67
RNF4-212ENST00000509258 CCL7P80098 99 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 ZBTB17Q13105 803 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 TBX2Q13207 712 aaPredicted RBP10.89□□□□□ -0.67
RNF4-212ENST00000509258 MESDQ14696 234 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 MARC1Q5VT66 337 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 SPECC1LQ69YQ0 1117 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 ALG1LQ6GMV1 187 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 TMPRSS9Q7Z410 1059 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 TECPR1Q7Z6L1 1165 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 TRIM74Q86UV6 250 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 HEATR4Q86WZ0 1026 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CCNJLQ8IV13 435 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 PLD5Q8N7P1 536 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 GPR156Q8NFN8 814 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 OR8K1Q8NGG5 319 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 OR56A4Q8NGH8 313 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 NSMCE1Q8WV22 266 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 PATE1Q8WXA2 126 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CEP41Q9BYV8 373 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CLMPQ9H6B4 373 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CYP4F12Q9HCS2 524 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 ABHD10Q9NUJ1 306 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 DTLQ9NZJ0 730 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 TFR2Q9UP52 801 aa10.89□□□□□ -0.67
RNF4-212ENST00000509258 CHKBQ9Y259 395 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms