RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SH2D7A6NKC9 451 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM90A9PA6NNJ1 464 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 AGAP14A8MT82 685 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 A8MV72 311 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM90A5PA8MXJ8 464 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBC1D3LB9A6J9 549 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 NKX2-8O15522 239 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 NOL3O60936 208 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBX10O75333 385 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 RPP40O75818 363 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CYP1A2P05177 515 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 EIF2S1P05198 315 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 UMODP07911 640 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ABCB1P08183 1280 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM90A15PP0C7V4 464 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM90A14PP0C7W9 464 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBC1D3HP0C7X1 549 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FDPSP14324 419 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF8P17098 575 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM11P17152 192 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 IFNAR1P17181 557 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 KLRK1P26718 216 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 MAPK3P27361 379 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TM4SF1P30408 202 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 HPDP32754 393 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ACSL1P33121 698 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 GGT5P36269 586 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 DPP6P42658 865 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 HDAC4P56524 1084 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 BPIFB3P59826 476 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARF5P84085 180 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PMPCAQ10713 525 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 COASYQ13057 564 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PDCLQ13371 301 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 THOC5Q13769 683 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 GPR18Q14330 331 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 GSTA3Q16772 222 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 DUSP6Q16828 381 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PRICKLE4Q2TBC4 344 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 GALNTL6Q49A17 601 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRTCAP3Q53RY4 240 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 HSP90AA5PQ58FG0 334 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 DNAJC21Q5F1R6 531 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF766Q5HY98 468 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 RAB41Q5JT25 222 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF484Q5JVG2 852 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 DCAF12L2Q5VW00 463 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBC1D3GQ6DHY5 549 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBC1D3CQ6IPX1 549 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CDC73Q6P1J9 531 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TATDN1Q6P1N9 297 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PLBD1Q6P4A8 553 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 KLHL35Q6PF15 583 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 MDGA2Q7Z553 956 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 WDR63Q8IWG1 891 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TBC1D3Q8IZP1 549 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 OR4N4Q8N0Y3 316 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CADM3Q8N126 398 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CLIP4Q8N3C7 705 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 DPP10Q8N608 796 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 POC5Q8NA72 575 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 LSM14AQ8ND56 463 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 SRFBP1Q8NEF9 429 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 OR1N1Q8NGS0 311 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 MOSPD2Q8NHP6 518 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC2A12Q8TD20 617 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 GRK7Q8WTQ7 553 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 SECISBP2LQ93073 1101 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 EXOC4Q96A65 974 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 VPS33AQ96AX1 596 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 KLHL29Q96CT2 875 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 BICD1Q96G01 975 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CCDC114Q96M63 670 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CFAP57Q96MR6 1250 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CMTM3Q96MX0 182 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 NR1H4Q96RI1 486 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FNBP1Q96RU3 617 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PI4K2AQ9BTU6 479 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 ABCG4Q9H172 646 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 CDT1Q9H211 546 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 OSGEPL1Q9H4B0 414 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 STN1Q9H668 368 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TTC12Q9H892 705 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 C17orf75Q9HAS0 396 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PDE7BQ9NP56 450 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PNRC2Q9NPJ4 139 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 RNF146Q9NTX7 359 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 INTS10Q9NVR2 710 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 PSD3Q9NYI0 1048 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 SUCLA2Q9P2R7 463 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC25A10Q9UBX3 287 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 AMACRQ9UHK6 382 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 XPO7Q9UIA9 1087 aaKnown RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 LEF1Q9UJU2 399 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 FZD10Q9ULW2 581 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 NAALADL1Q9UQQ1 740 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 KIF3AQ9Y496 699 aa2.46□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRBV5-7A0A0A0MS05 114 aa2.45□□□□□ -2.02
DEPDC1B-204ENST00000509006 hCG_1809904A0A1W2PP81 198 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms