RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IRF4Q15306 451 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 WSCD2Q2TBF2 565 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 HLA-BQ31612 363 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 SIRPB2Q5JXA9 342 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 STPG1Q5TH74 334 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PDPK2PQ6A1A2 396 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 CCDC137Q6PK04 289 aaKnown RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 RANBP10Q6VN20 620 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 MACC1Q6ZN28 852 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 TSPAN33Q86UF1 283 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 KLHDC8BQ8IXV7 354 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 SLC25A41Q8N5S1 370 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PRELID2Q8N945 189 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 TP53I13Q8NBR0 393 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 COG1Q8WTW3 980 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 BTN2A2Q8WVV5 523 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 AP2M1Q96CW1 435 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 MS4A14Q96JA4 679 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 BMFQ96LC9 184 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 ELF4Q99607 663 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 KLF6Q99612 283 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 FICDQ9BVA6 458 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 AP1M1Q9BXS5 423 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 EIF2B3Q9NR50 452 aaKnown RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 NFKBIL1Q9UBC1 381 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 COQ6Q9Y2Z9 468 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 SNX11Q9Y5W9 270 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PCDH15Q96QU1 1955 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 LAMA1P25391 3075 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 KNL1Q8NG31 2342 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 DOCK9Q9BZ29 2069 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SPTY2D1-AS1A0A0U1RR47 76 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 POM121BA6NF01 834 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 NEMP2A6NFY4 417 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 C4orf47A7E2U8 309 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 F5H423 210 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 SLC30A4O14863 429 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 FLRT2O43155 660 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PCDHGA12O60330 932 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 CLDN7O95471 211 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ECEL1O95672 775 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 WNT1P04628 370 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 APRTP07741 180 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ATXN1LP0C7T5 689 aaKnown RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 MYCLP1P12525 358 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 ADRA1AP35348 466 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TRIM23P36406 574 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 COILP38432 576 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 HADHAP40939 763 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ETV3P41162 512 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 GPR1P46091 355 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 RXRGP48443 463 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SPINT3P49223 89 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 CLDN2P57739 230 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 KIAA1024LP59773 190 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 BASP1P80723 227 aaKnown RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 SEMG2Q02383 582 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 CDH17Q12864 832 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SEMA5AQ13591 1074 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PEX6Q13608 980 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PDE1CQ14123 709 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 IHHQ14623 411 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 NFATC4Q14934 902 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PPP1R7Q15435 360 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TAF1AQ15573 450 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 ARMC3Q5W041 872 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 KCTD11Q693B1 232 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 RAET1GQ6H3X3 334 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PNCKQ6P2M8 343 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PPP1R21Q6ZMI0 780 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 Q6ZVL8 140 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SYDE1Q6ZW31 735 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 HSD11B1LQ7Z5J1 315 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TMC3Q7Z5M5 1100 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TECPR1Q7Z6L1 1165 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 CBARPQ8N350 705 aaPredicted RBP9.12□□□□□ -0.95
NUP54-207ENST00000508583 DNAAF3Q8N9W5 541 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 OR13H1Q8NG92 308 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 BRSK1Q8TDC3 778 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 BLOC1S5Q8TDH9 187 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TBATAQ96M53 351 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 WDR92Q96MX6 357 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 PLEKHG4BQ96PX9 1271 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 RTKNQ9BST9 563 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SLC13A1Q9BZW2 595 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 FAM83DQ9H4H8 585 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 SLC32A1Q9H598 525 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ETNK1Q9HBU6 452 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 ARNT2Q9HBZ2 717 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 GPR27Q9NS67 375 aa9.12□□□□□ -0.95
NUP54-207ENST00000508583 TM7SF3Q9NS93 570 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms