RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 EPSTI1Q96J88 318 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 SAMD8Q96LT4 415 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 PRICKLE1Q96MT3 831 aaPredicted RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 PARK7Q99497 189 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 DDX50Q9BQ39 737 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 DUSP26Q9BV47 211 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 NUP85Q9BW27 656 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 MRPL1Q9BYD6 325 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 LRRCC1Q9C099 1032 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 TINAGL1Q9GZM7 467 aaPredicted RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 CENPMQ9NSP4 180 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 LIN7CQ9NUP9 197 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 FBXO34Q9NWN3 711 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 ARHGEF38Q9NXL2 777 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 GDAP2Q9NXN4 497 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 QPCTLQ9NXS2 382 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 XPR1Q9UBH6 696 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 IPO11Q9UI26 975 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 TEKT2Q9UIF3 430 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 MKLN1Q9UL63 735 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC8A2Q9UPR5 921 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 STRAPQ9Y3F4 350 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 PLEKHM1Q9Y4G2 1056 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 ENTPD2Q9Y5L3 495 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC4A4Q9Y6R1 1079 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 DHX29Q7Z478 1369 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 TNIKQ9UKE5 1360 aa4.36□□□□□ -1.71
SMARCA5-202ENST00000508573 DRGXA6NNA5 263 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 VGLL3A8MV65 326 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 MYO1CO00159 1063 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 QSOX1O00391 747 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RASGRF2O14827 1237 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ZSCAN9O15535 394 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 LIASO43766 372 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GMFGO60234 142 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 CACNG3O60359 315 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 IL1AP01583 271 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 CCDC172P0C7W6 258 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 CHN1P15882 459 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 EPORP19235 508 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GUCY1A2P33402 732 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 VPS41P49754 854 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RAPSNQ13702 412 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 IDI1Q13907 227 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ASTE1Q2TB18 679 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF750Q32MQ0 723 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SPDYE7PQ495Y7 208 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 IGSF11Q5DX21 431 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 NOMO2Q5JPE7 1267 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 TCTE1Q5JU00 501 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 MFSD14BQ5SR56 506 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RIPPLY2Q5TAB7 128 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 AP1ARQ63HQ0 302 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 METRNLQ641Q3 311 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 JADE1Q6IE81 842 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 NOTUMQ6P988 496 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SERPINA13PQ6UXR4 307 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 NHLRC1Q6VVB1 395 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 PACS1Q6VY07 963 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RBM43Q6ZSC3 357 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 AACSQ86V21 672 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 AMZ2Q86W34 360 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 NUDT13Q86X67 352 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 TICAM1Q8IUC6 712 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 P3H2Q8IVL5 708 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 DHX40Q8IX18 779 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 DDIASQ8IXT1 998 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 PLD5Q8N7P1 536 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 LPCAT1Q8NF37 534 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 FBXO18Q8NFZ0 1043 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 OR7D4Q8NG98 312 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 OR2T34Q8NGX1 318 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GRAPLQ8TC17 118 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 IP6K1Q92551 441 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC9A6Q92581 669 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SGCDQ92629 289 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 KAT2AQ92830 837 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 DDX17Q92841 729 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 BCL2L2Q92843 193 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 TMEM186Q96B77 213 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 PTERQ96BW5 349 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SGF29Q96ES7 293 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RNFT2Q96EX2 444 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 FBXL20Q96IG2 436 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 PIWIL1Q96J94 861 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM227BQ96M60 508 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 SEMA3CQ99985 751 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GPR88Q9GZN0 384 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF350Q9GZX5 532 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 GLT8D2Q9H1C3 349 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 RIBC2Q9H4K1 309 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 BCO1Q9HAY6 547 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 NGBQ9NPG2 151 aa4.35□□□□□ -1.71
SMARCA5-202ENST00000508573 DNAJC11Q9NVH1 559 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms