RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 HACD3Q9P035 362 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 MARCH4Q9P2E8 410 aaPredicted RBP13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 USP22Q9UPT9 525 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 BTRCQ9Y297 605 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 VWA7Q9Y334 891 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 SH3BP1Q9Y3L3 701 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 V9GYQ6 96 aa13.43□□□□□ -0.26
SNCAIP-209ENST00000508017 TTC24A2A3L6 582 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MEIS3P2A8K0S8 358 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CDK14O94921 469 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 SLC4A1P02730 911 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 INHBBP09529 407 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 SMPD1P17405 629 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CES1P23141 567 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MAGEA10P43363 369 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 GEN1Q17RS7 908 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 SLC44A4Q53GD3 710 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CYBRD1Q53TN4 286 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ABRAXAS1Q6UWZ7 409 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 KIAA0408Q6ZU52 694 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CLYBLQ8N0X4 340 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MIER2Q8N344 545 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ZBTB8BQ8NAP8 495 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 OR13J1Q8NGT2 312 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MAGEE2Q8TD90 523 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TWIST2Q8WVJ9 160 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 DNAJB3Q8WWF6 145 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 SEZ6LQ9BYH1 1024 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TUBB1Q9H4B7 451 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 VTA1Q9NP79 307 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MID1IP1Q9NPA3 183 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 POLR3BQ9NW08 1133 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 NDUFAF1Q9Y375 327 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 A0A1B0GTL3 188 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 B4GAT1O43505 415 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 WISP3O95389 354 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CAPGP40121 348 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 MAGEA8P43361 318 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ARSDP51689 593 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 HERVK_113P63132 956 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF33AQ06730 810 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 BNIP2Q12982 314 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TGFBIQ15582 683 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 SLC14A2Q15849 920 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF829Q3KNS6 432 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF792Q3KQV3 632 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ANKRD26P1Q6NSI1 321 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 NANOGP8Q6NSW7 305 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 PTGR2Q8N8N7 351 aaPredicted RBP13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 DNAJB14Q8TBM8 379 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 PLEKHA8Q96JA3 519 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 TRMOQ9BU70 441 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 ERVK-6Q9BXR3 956 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 CRYL1Q9Y2S2 319 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 PCDHA9Q9Y5H5 950 aa13.42□□□□□ -0.26
SNCAIP-209ENST00000508017 KANSL1LA0AUZ9 987 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 H3BMM5 538 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 J3QRK9 145 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 LINC00032P0C843 101 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 GSK3BP49841 420 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 AFF1P51825 1210 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 C21orf59P57076 290 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 MAXP61244 160 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 SFSWAPQ12872 951 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 SNX17Q15036 470 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 PYCR3Q53H96 274 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 PRMT9Q6P2P2 845 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 TBPL2Q6SJ96 375 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 CILP2Q8IUL8 1156 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 OR6P1Q8NGX9 317 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF420Q8TAQ5 688 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 VPS33AQ96AX1 596 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 FBXL8Q96CD0 374 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 COX4I2Q96KJ9 171 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 PRKD2Q9BZL6 878 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 UBXN8O00124 270 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 MSI1O43347 362 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 MATN1P21941 496 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 RFC2P35250 354 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 RPS9P46781 194 aaKnown RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF135P52742 658 aaPredicted RBP13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 DIO3P55073 304 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 ECT2LQ008S8 904 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 IHHQ14623 411 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 FUT11Q495W5 492 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
SNCAIP-209ENST00000508017 ARTNQ5T4W7 220 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms