RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 XPAP23025 273 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 SSTR1P30872 391 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 HOXA6P31267 233 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 HADHAP40939 763 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 ARCN1P48444 511 aaKnown RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 CCR3P51677 355 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 STC1P52823 247 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 NUBP1P53384 320 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 MTAPQ13126 283 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 MTM1Q13496 603 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 CRYMQ14894 314 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 UAP1Q16222 522 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 CNGA3Q16281 694 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 TTC31Q49AM3 519 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 HP1BP3Q5SSJ5 553 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 LRRC66Q68CR7 880 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 DENND2CQ68D51 928 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 KIAA0930Q6ICG6 404 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 ESRP1Q6NXG1 681 aaKnown RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 ERAP2Q6P179 960 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 NEK5Q6P3R8 708 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 CASC4Q6P4E1 433 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 FBXO38Q6PIJ6 1188 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 UNC5AQ6ZN44 842 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 C3orf62Q6ZUJ4 267 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 LYSMD3Q7Z3D4 306 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 TECPR1Q7Z6L1 1165 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 TSPAN33Q86UF1 283 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 NLRP8Q86W28 1048 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 PALM2Q8IXS6 379 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 NRSN1Q8IZ57 195 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 HDDC3Q8N4P3 179 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 OR4K2Q8NGD2 314 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 OR13C4Q8NGS5 318 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 OR13J1Q8NGT2 312 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 GSDMBQ8TAX9 411 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 MFSD3Q96ES6 412 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 CDKN2AIPNLQ96HQ2 116 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 COQ10AQ96MF6 247 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 FCRL3Q96P31 734 aaPredicted RBP7.2□□□□□ -1.26
NUP54-204ENST00000506098 OMDQ99983 421 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 GPR63Q9BZJ6 419 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 CDH19Q9H159 772 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 SLC6A17Q9H1V8 727 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 ARFGAP3Q9NP61 516 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 FBXL12Q9NXK8 326 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 KCTD5Q9NXV2 234 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 SERGEFQ9UGK8 458 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 NCKAP1Q9Y2A7 1128 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 ARL5AQ9Y689 179 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 MAD1L1Q9Y6D9 718 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 RPS6KL1Q9Y6S9 549 aa7.2□□□□□ -1.26
NUP54-204ENST00000506098 A0A087WUV0 522 aaPredicted RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 CCDC163A0A0D9SF12 145 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 A0A0U1RQS6 177 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 AGAP14A8MT82 685 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 K7ESF4 209 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 GAPDHSO14556 408 aaPredicted RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 STX7O15400 261 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 ZNF217O75362 1048 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 RNASEH2AO75792 299 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 RPP40O75818 363 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 APBB3O95704 486 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 NUDT17P0C025 328 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 ELFN1P0C7U0 828 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 GM2AP17900 193 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PAMP19021 973 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 ARNTP27540 789 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 OXTRP30559 389 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PHBP35232 272 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 HSD17B3P37058 310 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PEX19P40855 299 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 CXCL12P48061 93 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SPINT3P49223 89 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 TPMTP51580 245 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 DCDC1P59894 354 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 XIAPP98170 497 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PEX6Q13608 980 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SEPT6Q14141 434 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 ARHGEF7Q14155 803 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SLC29A2Q14542 456 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 LONRF1Q17RB8 773 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 MAP7D1Q3KQU3 841 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 POM121L1PQ3SYA9 428 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 LRRC73Q5JTD7 316 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 UBAP2Q5T6F2 1119 aaKnown RBP7.19□□□□□ -1.26
NUP54-204ENST00000506098 ZDHHC20Q5W0Z9 365 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PDPK2PQ6A1A2 396 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 CES3Q6UWW8 571 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 ZNF765Q7L2R6 523 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 CYP2U1Q7Z449 544 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 LMNTD2Q8IXW0 634 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 IQCKQ8N0W5 287 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
NUP54-204ENST00000506098 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
NUP54-204ENST00000506098 TSTD1Q8NFU3 115 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms